Abstract

Rhizobia are one of the most important and best studied groups of bacterial symbionts. They are defined by their ability to establish nitrogen-fixing intracellular infections within plant hosts. One surprising feature of this symbiosis is that the bacterial genes required for this complex trait are not fixed within the chromosome, but are encoded on mobile genetic elements (MGEs), namely plasmids or integrative and conjugative elements. Evidence suggests that many of these elements are actively mobilizing within rhizobial populations, suggesting that regular symbiosis gene transfer is part of the ecology of rhizobial symbionts. At first glance, this is counterintuitive. The symbiosis trait is highly complex, multipartite and tightly coevolved with the legume hosts, while transfer of genes can be costly and disrupt coadaptation between the chromosome and the symbiosis genes. However, horizontal gene transfer is a process driven not only by the interests of the host bacterium, but also, and perhaps predominantly, by the interests of the MGEs that facilitate it. Thus understanding the role of horizontal gene transfer in the rhizobium–legume symbiosis requires a ‘mobile genetic element's-eye view' on the ecology and evolution of this important symbiosis.This article is part of the theme issue ‘The secret lives of microbial mobile genetic elements’.

Highlights

  • Rhizobia are defined by their ability to form intracellular, nitrogen-fixing infections in a broad range of plant hosts

  • One of the most surprising features of the rhizobial symbiosis is that, despite its complexity, the genes that underlie this defining characteristic are not embedded within the bacterial chromosome

  • Attempts to experimentally evolve novel nitrogen-fixing symbionts demonstrate that transfer of the symbiosis function to non-rhizobial hosts can be extremely challenging [100,101,102], implying that a significant level of pre-adaptation is required for successful utilization of the symbiosis genes

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Summary

Introduction

Rhizobia are defined by their ability to form intracellular, nitrogen-fixing infections in a broad range of plant hosts. This trait is highly complex and often tightly coevolved with the specific plant hosts they inhabit. One of the most surprising features of the rhizobial symbiosis is that, despite its complexity, the genes that underlie this defining characteristic are not embedded within the bacterial chromosome Rather, they are encoded on mobile genetic elements (MGEs). Rhizobia must respond to and communicate with their specific plant hosts, infect and form intracellular colonies within plant nodules (controlled by nod genes) and undergo sophisticated cell differentiation in order to devote cellular metabolism to the highly energy-intensive process of nitrogen fixation. We will examine the world of the sym element, asking two central questions: how mobile is the symbiosis, and what forces shape mobility among sym elements?

How mobile is symbiosis?
What forces may act to maintain mobility?
Conclusion and future directions
28. González V et al 2003 The mosaic structure of the
50. Ramsay JP et al 2015 Ribosomal frameshifting and
Findings
78. Greenlon A et al 2019 Global-level population
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