Abstract
We consider a class of neural circuit models with internal noise sources arising in sensory systems. The basic neuron model in these circuits consists of a dendritic stimulus processor (DSP) cascaded with a biophysical spike generator (BSG). The dendritic stimulus processor is modeled as a set of nonlinear operators that are assumed to have a Volterra series representation. Biophysical point neuron models, such as the Hodgkin-Huxley neuron, are used to model the spike generator. We address the question of how intrinsic noise sources affect the precision in encoding and decoding of sensory stimuli and the functional identification of its sensory circuits. We investigate two intrinsic noise sources arising (i) in the active dendritic trees underlying the DSPs, and (ii) in the ion channels of the BSGs. Noise in dendritic stimulus processing arises from a combined effect of variability in synaptic transmission and dendritic interactions. Channel noise arises in the BSGs due to the fluctuation of the number of the active ion channels. Using a stochastic differential equations formalism we show that encoding with a neuron model consisting of a nonlinear DSP cascaded with a BSG with intrinsic noise sources can be treated as generalized sampling with noisy measurements. For single-input multi-output neural circuit models with feedforward, feedback and cross-feedback DSPs cascaded with BSGs we theoretically analyze the effect of noise sources on stimulus decoding. Building on a key duality property, the effect of noise parameters on the precision of the functional identification of the complete neural circuit with DSP/BSG neuron models is given. We demonstrate through extensive simulations the effects of noise on encoding stimuli with circuits that include neuron models that are akin to those commonly seen in sensory systems, e.g., complex cells in V1.
Highlights
Intrinsic noise sources are diverse and appear on many levels of a neuronal system ranging from electrical to chemical noise sources (Faisal et al, 2008; Destexhe and Rudolph-Lilith, 2012) and from single cells to networks of neurons
EFFECT OF NOISE ON STIMULUS DECODING we investigate the effect of noise sources (i) on spike timing of the reduced PIF neuron, and (ii) on the decoding of stimuli encoded with a neural circuit
In this paper, we introduced a novel neural circuit architecture based on a neuron model with a biophysical mechanism of spike generation and feedforward as well as feedback dendritic stimulus processors with intrinsic noise sources
Summary
Intrinsic noise sources are diverse and appear on many levels of a neuronal system ranging from electrical to chemical noise sources (Faisal et al, 2008; Destexhe and Rudolph-Lilith, 2012) and from single cells to networks of neurons. The first dendritic stimulus processor performs nonlinear processing of input stimuli in the feedforward path leading to the spike generator. The second dendritic stimulus processor performs nonlinear processing in the feedback loop whose inputs are spike trains generated by biophysical spike generators (BSGs). Our nonlinear dendritic stimulus processors describe functional I/O relationships between the dendritic outputs in the first stage and inputs that are either sensory stimuli or spikes generated by BSGs. DSPs are modeled using Volterra series. We formulate the encoding, decoding and functional identification problems under the neural encoding framework of Time Encoding Machines (TEMs) In this modeling framework the exact timing of spikes is considered to carry information about input stimuli (Lazar and Tóth, 2004). Instead of time-varying stimuli, the output spikes generated by the BSGs are the inputs to these DSPs. We refer to these as feedback Dendritic.
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