Abstract

Collective behavior, both in real biological systems and in theoretical models, often displays a rich combination of different kinds of order. A clear-cut and unique definition of "phase" based on the standard concept of the order parameter may therefore be complicated, and made even trickier by the lack of thermodynamic equilibrium. Compression-based entropies have been proved useful in recent years in describing the different phases of out-of-equilibrium systems. Here, we investigate the performance of a compression-based entropy, namely, the computable information density, within the Vicsek model of collective motion. Our measure is defined through a coarse graining of the particle positions, in which the key role of velocities in the model only enters indirectly through the velocity-density coupling. We discover that such entropy is a valid tool in distinguishing the various noise regimes, including the crossover between an aligned and misaligned phase of the velocities, despite the fact that velocities are not explicitly used. Furthermore, we unveil the role of the time coordinate, through an encoding recipe, where space and time localities are both preserved on the same ground, and find that it enhances the signal, which may be particularly significant when working with partial and/or corrupted data, as is often the case in real biological experiments.

Highlights

  • Statistical physics and information theory have a long history of cross-fertilization [1], with both disciplines based on a key concept: a quantitative statistical measure of order [2,3]

  • We consider here an archetypical model of collective behavior in biological systems, the Vicsek model (VM) [18], which we study in two dimensions

  • We have studied a measure based on data compression and applied it to the Vicsek model, a nonequilibrium active system which describes collective behavior in biological systems

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Summary

INTRODUCTION

Statistical physics and information theory have a long history of cross-fertilization [1], with both disciplines based on a key concept: a quantitative statistical measure of order [2,3]. CID was shown to give clear signatures of important transitions in the systems studied, which included several absorbing state models [14] as well as an active matter model, repulsive active Brownian particles (ABPs), where motility-induced phase separation appears at large enough concentrations [15] We note that these models lack first-principles Hamiltonians, which makes this quantification of order even more compelling.

The Vicsek model
Coarse graining
Scanning
RESULTS
Setting the discretization scale b
Dependence on the time window T and on the time encoding
Probing the phase diagram with Q
Coping with corrupted data
CONCLUSIONS
The LZ77 ALGORITHM
Data corruption

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