Abstract
A clinical tool that can diagnose psychiatric illness using functional or structural magnetic resonance (MR) brain images has the potential to greatly assist physicians and improve treatment efficacy. Working toward the goal of automated diagnosis, we propose an approach for automated classification of ADHD and autism based on histogram of oriented gradients (HOG) features extracted from MR brain images, as well as personal characteristic data features. We describe a learning algorithm that can produce effective classifiers for ADHD and autism when run on two large public datasets. The algorithm is able to distinguish ADHD from control with hold-out accuracy of 69.6% (over baseline 55.0%) using personal characteristics and structural brain scan features when trained on the ADHD-200 dataset (769 participants in training set, 171 in test set). It is able to distinguish autism from control with hold-out accuracy of 65.0% (over baseline 51.6%) using functional images with personal characteristic data when trained on the Autism Brain Imaging Data Exchange (ABIDE) dataset (889 participants in training set, 222 in test set). These results outperform all previously presented methods on both datasets. To our knowledge, this is the first demonstration of a single automated learning process that can produce classifiers for distinguishing patients vs. controls from brain imaging data with above-chance accuracy on large datasets for two different psychiatric illnesses (ADHD and autism). Working toward clinical applications requires robustness against real-world conditions, including the substantial variability that often exists among data collected at different institutions. It is therefore important that our algorithm was successful with the large ADHD-200 and ABIDE datasets, which include data from hundreds of participants collected at multiple institutions. While the resulting classifiers are not yet clinically relevant, this work shows that there is a signal in the (f)MRI data that a learning algorithm is able to find. We anticipate this will lead to yet more accurate classifiers, over these and other psychiatric disorders, working toward the goal of a clinical tool for high accuracy differential diagnosis.
Highlights
Mental disorders impose huge personal costs to individual patients and their families as well as economic costs to society [1, 2]
Our work makes two specific contributions: a) We show that Histogram of oriented gradients (HOG) feature descriptors of either resting state fMRI or structural magnetic resonance imaging (MRI) data can be useful for classifying psychiatric disorders with accuracy above chance. b) The presented method outperforms all previously-published classification results for ADHD and autism using the two large resting-state fMRI/MRI datasets mentioned above
Section Functional images represents the results of the learning using only resting state fMRI (RS-fMRI)
Summary
Mental disorders impose huge personal costs to individual patients and their families as well as economic costs to society [1, 2]. We work toward improving automated diagnosis for mental illness using machine learning with structural magnetic resonance imaging (MRI) [3] and functional MRI [4] of the brain. The basic approach is to use such MRI data as input to a machine learning algorithm to create classifiers that can classify (diagnose) novel individuals as patients or healthy controls. This was the goal of the 2011 ADHD-200 Global Competition [5,6,7]. The ADHD-200 Consortium made available a large dataset of functional and structural MRI data from patients with ADHD and healthy controls—almost one thousand participants in total. Work subsequent to the competition has improved the accuracy to 66.7% [9]
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