Abstract

BackgroundFlax lignan, commonly known as secoisolariciresinol (SECO) diglucoside (SDG), has recently been reported with health-promoting activities, including its positive impact in metabolic diseases. However, not much was reported on the biosynthesis of SDG and its monoglucoside (SMG) until lately. Flax UGT74S1 was recently reported to sequentially glucosylate SECO into SMG and SDG in vitro. However, whether this gene is the only UGT achieving SECO glucosylation in flax was not known.ResultsFlax genome-wide mining for UGTs was performed. Phylogenetic and gene duplication analyses, heterologous gene expression and enzyme assays were conducted to identify family members closely related to UGT74S1 and to establish their roles in SECO glucosylation. A total of 299 different UGTs were identified, of which 241 (81%) were duplicated. Flax UGTs diverged 2.4–153.6 MYA and 71% were found to be under purifying selection pressure. UGT74S1, a single copy gene located on chromosome 7, displayed no evidence of duplication and was deemed to be under positive selection pressure. The phylogenetic analysis identified four main clusters where cluster 4, which included UGT74S1, was the most diverse. The duplicated UGT74S4 and UGT74S3, located on chromosomes 8 and 14, respectively, were the most closely related to UGT74S1 and were differentially expressed in different tissues. Heterologous expression levels of UGT74S1, UGT74S4 and UGT74S3 proteins were similar but UGT74S4 and UGT74S3 glucosylation activity towards SECO was seven fold less than UGT74S1. In addition, they both failed to produce SDG, suggesting neofunctionalization following their divergence from UGT74S1.ConclusionsWe showed that UGT74S1 is closely related to two duplicated genes, UGT74S4 and UGT74S3 which, unlike UGT74S1, failed to glucosylate SMG into SDG. The study suggests that UGT74S1 may be the key player in controlling SECO glucosylation into SDG in flax although its closely related genes may also contribute to a minor extent in supplying the SMG precursor to UGT74S1.

Highlights

  • Flax lignan, commonly known as secoisolariciresinol (SECO) diglucoside (SDG), has recently been reported with health-promoting activities, including its positive impact in metabolic diseases

  • By performing 3D modeling of the UGT74S1 protein followed by ligand docking, targeted sitedirected mutagenesis, heterologous expression and enzyme assays, Gln337 and Ser357 were found to be essential for the glucosylation of SDG and its monoglucoside (SMG) into secoisolariciresinol diglucoside (SDG), whereas Trp355 and His352 appeared to be critical for UGT74S1 glucosylation activity toward SECO in vitro [20]

  • Uridine glycosyltransferases (UGT) gene duplication and diversity in the flax genome Genome-wide mining for UGT genes identified 299 non-redundant sequences dispersed on all 15 flax chromosomes (Additional files 3 and 4)

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Summary

Introduction

Commonly known as secoisolariciresinol (SECO) diglucoside (SDG), has recently been reported with health-promoting activities, including its positive impact in metabolic diseases. Flax UGT74S1 was recently reported to sequentially glucosylate SECO into SMG and SDG in vitro. Whether this gene is the only UGT achieving SECO glucosylation in flax was not known. To Barvkar’s flax genome data mining study [17], we cloned and characterized five family 1 UGT genes (JX011632, JX011633, JX011634, JX011635, JX011636) and demonstrated that UGT74S1 (JX011632) was the only one able to glucosylate SECO by sequentially forming SMG and SDG [19]. Whether UGT74S1 was the only UGT achieving the SECO glucosylation into SDG in the flax genome remained unknown

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