Abstract

EDEM1 is a mannosidase-like protein that recruits misfolded glycoproteins from the calnexin/calreticulin folding cycle to downstream endoplasmic reticulum associated degradation (ERAD) pathway. Here, we investigate the role of EDEM1 in the processing of tyrosinase, a tumour antigen overexpressed in melanoma cells. First, we analyzed and modeled EDEM1 major domains. The homology model raised on the crystal structures of human and Saccharomyces cerevisiae ER class I α1,2-mannosidases reveals that the major mannosidase domain located between aminoacids 121–598 fits with high accuracy. We have further identified an N-terminal region located between aminoacids 40–119, predicted to be intrinsically disordered (ID) and susceptible to adopt multiple conformations, hence facilitating protein-protein interactions. To investigate these two domains we have constructed an EDEM1 deletion mutant lacking the ID region and a triple mutant disrupting the glycan-binding domain and analyzed their association with tyrosinase. Tyrosinase is a glycoprotein partly degraded endogenously by ERAD and the ubiquitin proteasomal system. We found that the degradation of wild type and misfolded tyrosinase was enhanced when EDEM1 was overexpressed. Glycosylated and non-glycosylated mutants co-immunoprecipitated with EDEM1 even in the absence of its intact mannosidase-like domain, but not when the ID region was deleted. In contrast, calnexin and SEL 1L associated with the deletion mutant. Our data suggest that the ID region identified in the N-terminal end of EDEM1 is involved in the binding of glycosylated and non-glycosylated misfolded proteins. Accelerating tyrosinase degradation by EDEM1 overexpression may lead to an efficient antigen presentation and enhanced elimination of melanoma cells.

Highlights

  • Secretory and membrane proteins are synthesized on bound ribosomes and co-translationally translocated in the endoplasmic reticulum (ER) lumen where folding occurs

  • EDEM1–3 proteins were traditionally predicted to act as lectins [6], by sequence similarity these proteins belong to a mannosidase-like group of enzymes known as the Glycosyl hydrolase family 47 (CAZY: GH47, PFAM: PF01532)

  • We show that aside its mannosidase-like domain, EDEM1 has an intrinsically disordered (ID) region involved in the interaction with tyrosinase mutants, but not with calnexin and SEL1L

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Summary

Introduction

Secretory and membrane proteins are synthesized on bound ribosomes and co-translationally translocated in the endoplasmic reticulum (ER) lumen where folding occurs. Sequential trimming of the N-glycans by ER glucosidases generates monoglucosylated glycans (GlcMan9) that are recognized by calnexin/calreticulin. These lectins impede the premature export of the nascent polypeptide chain from the ER [3]. By recognizing the monoglucosylated glycans, calnexin/calreticulin introduces the glycosylated polypeptide into a cycle where de- and re-glucosylation of the glycans are determined by the detection of exposed hydrophobic patches in the presence of the two key proteins, glucosyl transferase and glucosidase II [4]. Folded proteins are retained in the ER, allowing ER mannosidases to generate Man8-Man glycan structures by mannose trimming [5]. The mannosidase-like (GH47) domain covers ,75% of the EDEM1 sequence and due to it, the specificity of EDEM1 for Man glycans has been always assumed but never demonstrated

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