Transcriptional profilling to identify the inhibitor effect of trehalose as an alternative natural therapeutic agent on pterygium cells

Abstract

Aims/Purpose: The aim of this study to investigate transcriptome analysis of the inhibitory effects of trehalose on changing expression of regulator genes in pterygium development.Methods: Human primary pterygium cells and normal conjunctiva cells were isolated from the pterygium and conjunctiva tissues of six individuals, three of whom were men and three of which were females. The MTT test was used to investigate cell proliferation in pterygium treated with different concentrations dosage of trehalose. Differential mRNA expression in pterygium cells following indicative treatment was measured using an mRNA microarray and evaluated using GO and KEGG pathways. In addition, we employed QRT‐PCR to confirm the expression levels of genes linked to pterygium pathogenesis.Results: We have found that pterygium cells are more sensitive to trehalose treatment than conjunctival cell. In total, 419 probe were differentially expressed pterygium cells treated with trehalose compared with paired non‐treated pterygium cells. Gene‐Enrichment and Functional Annotation analysis indicated that differentially expressed RNAs were associated with cellular process including especially fibroblastic cell migration, sterol biosynthetic process (p < 0.00034), extracellular matrix recomposition (p < 0.000740288), cell proliferation (p < 0.004391252), steroid biosynthetic process (p < 0.00029971). Composed of Gene Ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway, protein–protein interaction (PPI), and gene set enrichment analysis (GSEA) analysis, bioinformatic analyses showed that four hub genes were upregulated (MSMO, RANBP3L, DHCR7, CCL2) and five were downregulated (NR4A1, TENASTN C, CXCL8, CXCL12, ADAMTS12). Additionally, QRT‐PCR is used to confirm the expression of particular genes. Consistent with these findings, the migration capability of pterygium cells decreased after treatment of trehalose for 24 h.Conclusions: We consider that this study provides a scientific basis for elucidating the effect of trehalose on the pathogenesis of pterygium and exhibited that trehalose affects cellular processes that have essential roles in the progression and development of pterygium.