Abstract

Lysobacter enzymogenes is a ubiquitous, beneficial, plant-associated bacterium emerging as a novel biological control agent. It has the potential to become a new source of antimicrobial secondary metabolites such as the Heat-Stable Antifungal Factor (HSAF), which is a broad-spectrum antimycotic with a novel mode of action. However, very little information about how L. enzymogenes detects and responds to fungi or oomycetes has been reported. An in vitro confrontation bioassay between the pathogenic oomycete Pythium aphanidermatum and the biocontrol bacterial strain L. enzymogenes OH11 was used to analyze the transcriptional changes in the bacteria that were induced by the oomycetes. Analysis was performed at three time points of the interaction, starting before inhibition zone formation until inhibition zone formation. A L. enzymogenes OH11 DNA microarray was constructed for the analysis. Microarray analysis indicated that a wide range of genes belonging to 14 diverse functions in L. enzymogenes were affected by P. aphanidermatum as critical antagonistic effects occurred. L. enzymogenes detected and responded to the presence of P. aphanidermatum early, but alteration of gene expression typically occurred after inhibition zone formation. The presence of P. aphanidermatum increased the twitching motility and HSAF production in L. enzymogenes. We also performed a contact interaction between L. enzymogenes and P. aphanidermatum, and found that HSAF played a critical role in the interaction. Our experiments demonstrated that L. enzymogenes displayed transcriptional and antagonistic responses to P. aphanidermatum in order to gain advantages in the competition with this oomycete. This study revealed new insights into the interactions between bacteria and oomycete.

Highlights

  • Fungal-bacterial interactions are ubiquitous in complex ecological niches

  • The results possibly indicate that at 24 h, before inhibition zone formation, L. enzymogenes sensed the presence of P. aphanidermatum and increased the expression of Heat-Stable Antifungal Factor (HSAF) biosynthetic genes to produce and accumulate HSAF to inhibit the growth of the oomycetes

  • We investigated the potential effects of P. aphanidermatum on L. enzymogenes

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Summary

Introduction

Fungal-bacterial interactions are ubiquitous in complex ecological niches They often influence each other’s physiology and metabolism, and their interactions vary from synergism to mutualism to antagonism. The influence on fungi of living bacteria at the gene expression level was reported by Deveau et al (2007), who demonstrated that the mycorrhiza helper Pseudomonas fluorescens BBc6R8 induced growth and transcriptional changes in the ectomycorrhizal fungus Laccaria bicolor S238N. A recent study reported that fungal innate immunity was induced when Fusarium graminearum was exposed to bacterial Microbe-Associated Molecular Patterns (MAMPs); this induction included increases in mitochondrial activity and iron sequestration, as well as the upregulation of genes that encode proteins involved in defense (Ipcho et al, 2016)

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