Abstract

BackgroundPiwi-interacting RNAs (piRNAs) are a special class of small RNAs that provide defense against transposable elements in animal germline cells. In Drosophila, germline piRNAs are thought to be processed at a unique perinuclear structure, the nuage, that houses piRNA pathway proteins including the Piwi clade of Argonaute family proteins, along with several Tudor domain proteins, RNA helicases and nucleases. We previously demonstrated that Tudor domain protein Tejas (Tej), an ortholog of vertebrate Tdrd5, is an important component of the piRNA pathway.ResultsIn the current study, we identified the paralog of the Drosophila tej gene, tapas (tap), which is an ortholog of vertebrate Tdrd7. Like Tej, Tap is localized at the nuage. Alone, tap loss leads to a mild increase in transposon expression and decrease in piRNAs targeting transposons expressed in the germline. The tap gene genetically interacts with other piRNA pathway genes and we also show that Tap physically interacts with piRNA pathway components, such as Piwi family proteins Aubergine and Argonaute3 and the RNA helicases Spindle-E and Vasa. Together with tej, tap is required for survival of germline cells during early stages and for polarity formation. We further observed that loss of tej and tap together results in more severe defects in the piRNA pathway in germline cells compared to single mutants: the double-mutant ovaries exhibit mis-localization of piRNA pathway components and significantly greater reduction of piRNAs against transposons predominantly expressed in germline compared to single mutants. The single or double mutants did not have any reduction in piRNAs mapping to transposons predominantly expressed in gonadal somatic cells or those derived from unidirectional clusters such as flamenco. Consistently, the loss of both tej and tap function resulted in mis-localization of Piwi in germline cells, whereas Piwi remained localized to the nucleus in somatic cells.ConclusionsOur observations suggest that tej and tap work together for germline maintenance. tej and tap also function in a synergistic manner to maintain examined piRNA components at the perinuclear nuage and for piRNA production in Drosophila germline cells.Electronic supplementary materialThe online version of this article (doi:10.1186/s12915-014-0061-9) contains supplementary material, which is available to authorized users.

Highlights

  • Piwi-interacting RNAs are a special class of small RNAs that provide defense against transposable elements in animal germline cells

  • Results tap encodes a conserved Tudor domain protein that localizes to the nuage We previously reported a Tudor domain protein Tej as a germline Piwi-interacting RNA (piRNA) pathway component required for transposons repression and nuage localization of several other piRNA pathway components [16]

  • Given its similarity with Tej, we addressed if Tap, like many other Tudor domain proteins, functions in the piRNA pathway in the germline [15,16,24,25,26,27]

Read more

Summary

Introduction

Piwi-interacting RNAs (piRNAs) are a special class of small RNAs that provide defense against transposable elements in animal germline cells. Primary processing, which involves Piwi, occurs in both somatic and germline cells of gonads In this process, precursor transcripts from genomic clusters, which are specialized sites harboring fragmented transposons copies incapable of mobilization, are randomly processed into 23- to 29-nucleotide piRNAs that are in antisense orientation to the transposons. The ping-pong cycle occurs only in germline cells and involves the two other Piwi family proteins, Aub and Ago (reviewed in [1]). This process is hypothesized to involve the cutting of transposon transcripts by Piwi/Aub-bound antisense piRNAs and the loading of resultant sense piRNAs onto Ago. The Ago complex cleaves antisense cluster transcripts for further processing into antisense piRNAs [6,7]

Methods
Results
Discussion
Conclusion

Talk to us

Join us for a 30 min session where you can share your feedback and ask us any queries you have

Schedule a call

Disclaimer: All third-party content on this website/platform is and will remain the property of their respective owners and is provided on "as is" basis without any warranties, express or implied. Use of third-party content does not indicate any affiliation, sponsorship with or endorsement by them. Any references to third-party content is to identify the corresponding services and shall be considered fair use under The CopyrightLaw.