Abstract

Type 1 Diabetes (T1D) is regarded as an autoimmune disease characterized by insulin deficiency resulting from destruction of pancreatic β-cells. The incidence rates of T1D have increased worldwide. Over the past decades, progress has been made in understanding the complexity of the immune response and its role in T1D pathogenesis, however, the trigger of T1D autoimmunity remains unclear. The increasing incidence rates, immigrant studies, and twin studies suggest that environmental factors play an important role and the trigger cannot simply be explained by genetic predisposition. Several research initiatives have identified environmental factors that potentially contribute to the onset of T1D autoimmunity and the progression of disease in children/young adults. More recently, the interplay between gut microbiota and the immune system has been implicated as an important factor in T1D pathogenesis. Although results often vary between studies, broad compositional and diversity patterns have emerged from both longitudinal and cross-sectional human studies. T1D patients have a less diverse gut microbiota, an increased prevalence of Bacteriodetes taxa and an aberrant metabolomic profile compared to healthy controls. In this comprehensive review, we present the data obtained from both animal and human studies focusing on the large longitudinal human studies. These studies are particularly valuable in elucidating the environmental factors that lead to aberrant gut microbiota composition and potentially contribute to T1D. We also discuss how environmental factors, such as birth mode, diet, and antibiotic use modulate gut microbiota and how this potentially contributes to T1D. In the final section, we focus on existing recent literature on microbiota-produced metabolites, proteins, and gut virome function as potential protectants or triggers of T1D onset. Overall, current results indicate that higher levels of diversity along with the presence of beneficial microbes and the resulting microbial-produced metabolites can act as protectors against T1D onset. However, the specifics of the interplay between host and microbes are yet to be discovered.

Highlights

  • The human microbiome consists of trillions of bacterial, viral, and fungal microorganisms [1]

  • This study found a decrease in microbial diversity and a reduction in bacterial gene content in autoantibody-positive children during progression toward Type 1 Diabetes (T1D)

  • This study demonstrated a potential mechanism using in vitro experiments which elucidated the structural and functional characteristics of Bacteroides dorei LPS compared to E. coli LPS

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Summary

INTRODUCTION

The human microbiome consists of trillions of bacterial, viral, and fungal microorganisms [1]. The microbiome is correlated with autoimmune diseases via direct and indirect interactions with innate and adaptive immune cells This results in loss of immune tolerance, chronic inflammation, and immune response against host tissues [31,32,33]. We will discuss the findings from both human longitudinal studies and NOD mice studies and the role of gut microbiota as it relates to environmental factors in type 1 diabetes pathogenesis. To identify the causative environmental triggers of disease onset, longitudinal studies of large at-risk cohorts are required across a wide geographical range Such efforts have been initiated and include: TEDDY, DIABIMMUNE, BABYDIET (a substudy of the larger BABYDIAB), ABIS, TRIGR, and FINDIA (a substudy with in the Type 1 Diabetes Prediction and PreventionDIPP Study).

Birth Method
Findings
Birth Method and Its Role in Gut
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