Abstract

BackgroundLargemouth bronze gudgeon (Coreius guichenoti) is of economic importance in China, distributed in upstream regions of the Yangtze River in China. But it has recently dramatically declined and is close to elimination. However, there is little knowing about the character of its intestinal microbiota. This study was conducted to elucidate the intestinal microbiota of wild largemouth bronze gudgeon with different body weight and gender.ResultsThirty wild largemouth bronze gudgeon were measured for body length and body weight, and identified for male and female according to gonadal development, and thereafter the intestinal microbiota’s were assessed by MiSeq sequencing of 16S rRNA genes. The results revealed that phyla Proteobacteria and Tenericutes were dominant in wild largemouth bronze gudgeon intestine independent of the body weight. Shannon’s and Inverse Simpson’s diversity indexes were significant (P < 0.05) different between male and female fish. The phylum profile in the intestine of male fish revealed that phylum Proteobacteria was dominant, in contrast to female fish where five phyla Tenericutes, Proteobacteria, Firmicutes, Fusobacteria and Spirochaetes were dominant. The genus profile revealed that genera Shewanella and Unclassified bacteria were dominant in male fish, while genus Mycoplasma was dominant in female fish.ConclusionsOur results revealed that the intestinal microbial community of wild largemouth bronze gudgeon was dominated by the phyla Proteobacteria and Tenericutes regardless of the different body weight, but the communities are significant different between male and female fish. These results provide a theoretical basis to understand the biological mechanisms relevant to the protection of the endangered fish species.

Highlights

  • Largemouth bronze gudgeon (Coreius guichenoti) is of economic importance in China, distributed in upstream regions of the Yangtze River in China

  • We calculated the number of operational taxonomical units (OTUs), and they were analyzed for each sample with a 97 % sequence similarity cutoff value

  • Intestinal microbial community in fish with different body weight To provide an overview of the sequence reads associated with wild caught largemouth bronze gudgeon intestine, the 30 samples were divided into three groups according to fish body weight: large fish (>2 kg, 4 samples), medium fish and small fish (

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Summary

Introduction

Largemouth bronze gudgeon (Coreius guichenoti) is of economic importance in China, distributed in upstream regions of the Yangtze River in China. It has recently dramatically declined and is close to elimination. Largemouth bronze gudgeon (Coreius guichenoti, Sauvage et Dabry, 1874) is a freshwater fish of the Cyprinidae family, distributed in upstream regions of the Yangtze River. It is of economic importance in China and the largest weight they can reach is 4.0 kg [1, 2]. No information is available on the intestinal microbiota of largemouth bronze gudgeon, a fish species of economic importance in of the Yangtze River

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