Abstract

In Escherichia coli, FtsLB plays a central role in the initiation of cell division, possibly transducing a signal that will eventually lead to the activation of peptidoglycan remodeling at the forming septum. The molecular mechanisms by which FtsLB operates in the divisome, however, are not understood. Here, we present a structural analysis of the FtsLB complex, performed with biophysical, computational, and in vivo methods, that establishes the organization of the transmembrane region and proximal coiled coil of the complex. FRET analysis in vitro is consistent with formation of a tetramer composed of two FtsL and two FtsB subunits. We predicted subunit contacts through co-evolutionary analysis and used them to compute a structural model of the complex. The transmembrane region of FtsLB is stabilized by hydrophobic packing and by a complex network of hydrogen bonds. The coiled coil domain probably terminates near the critical constriction control domain, which might correspond to a structural transition. The presence of strongly polar amino acids within the core of the tetrameric coiled coil suggests that the coil may split into two independent FtsQ-binding domains. The helix of FtsB is interrupted between the transmembrane and coiled coil regions by a flexible Gly-rich linker. Conversely, the data suggest that FtsL forms an uninterrupted helix across the two regions and that the integrity of this helix is indispensable for the function of the complex. The FtsL helix is thus a candidate for acting as a potential mechanical connection to communicate conformational changes between periplasmic, membrane, and cytoplasmic regions.

Highlights

  • To predict the positions that mediate the association of the FtsLB complex, we analyzed a paired alignment of FtsL and FtsB sequences from proteobacteria species using the EV-Couplings algorithm [56]

  • It is based on the notion that, to maintain complementary interactions, amino acid changes influence the variation of positions that are in close proximity

  • We demonstrated that the isolated TM region of the FtsLB complex assembles to form a higher-order oligomer consisting of an equal number of FtsL and FtsB subunits, but we were unable to distinguish between heterotetrameric (L2B2), heterohexameric (L3B3), or even higher oligomeric forms [43]

Read more

Summary

Structural analysis of the FtsLB tetrameric complex

Of the divisome include FtsEX, an ABC transporter-like complex that controls cell wall hydrolysis and possibly divisome assembly [21, 22], as well as FtsK, a DNA translocase important for chromosome segregation [23]. Peptides corresponding to the TM helices form a stable higher-order oligomer in vitro, with an equal number of FtsL and FtsB subunits, indicating that the TM region is an important contributor to the stability of the complex [43] This is consistent with the observation that the TM domains are biologically important [6, 44, 45]. The work includes in vitro FRET to determine the oligomerization state of FtsLB; a co-evolutionary analysis of sequence alignments to provide an extensive set of predicted contacts between positions in FtsL and FtsB; molecular modeling to compute a three-dimensional structural model of the complex; molecular dynamics in lipid bilayers to evaluate stability and dynamics of the model; and a functional analysis of mutants in vivo to experimentally test the model and investigate the biological relevance of the predicted structural features. We found indications that the coiled coil might not be built for structural stability, at least not in the form of a canonical tetrameric helical bundle assembly, suggesting that the coil may either serve as a dynamic structural unit or else split into two independent domains

Results and discussion
Molecular modeling of the FtsLB helical bundle
The juxtamembrane and coiled coil of FtsB are tolerant to mutation
Conclusions
Experimental procedures
Modeling the TM region of FtsLB
Modeling the coiled coil domains of FtsL and FtsB
Modeling the juxtamembrane regions of FtsL and FtsB
FRET measurements
Fitting of experimental FRET data to obtain the number of subunits
Depletion strain experiments
Microscopy and cell length measurement
Full Text
Published version (Free)

Talk to us

Join us for a 30 min session where you can share your feedback and ask us any queries you have

Schedule a call