Abstract
Two multisubunit protein complexes for membrane protein insertion were recently identified in the endoplasmic reticulum (ER): the guided entry of tail anchor proteins (GET) complex and ER membrane complex (EMC). The structures of both of their hydrophobic core subunits, which are required for the insertion reaction, revealed an overall similarity to the YidC/Oxa1/Alb3 family members found in bacteria, mitochondria, and chloroplasts. This suggests that these membrane insertion machineries all share a common ancestry. To test whether these ER proteins can functionally replace Oxa1 in yeast mitochondria, we generated strains that express mitochondria-targeted Get2-Get1 and Emc6-Emc3 fusion proteins in Oxa1 deletion mutants. Interestingly, the Emc6-Emc3 fusion was able to complement an Δoxa1 mutant and restored its respiratory competence. The Emc6-Emc3 fusion promoted the insertion of the mitochondrially encoded protein Cox2, as well as of nuclear encoded inner membrane proteins, although was not able to facilitate the assembly of the Atp9 ring. Our observations indicate that protein insertion into the ER is functionally conserved to the insertion mechanism in bacteria and mitochondria and adheres to similar topological principles.
Highlights
Membranes of bacteria and eukaryotic cells contain different protein translocases
It was suggested that the DUF106 family gave rise to Emc3 and Get1 on the basis of very similar overall structural organization [34,35,40]
These trees supported the common origin of Oxa1, Alb3, and YidC very well and indicated good bootstrap support for their relationship with members of the DUF106, Get1, and Emc3 families (S1 Fig, S1–S3 Data)
Summary
Membranes of bacteria and eukaryotic cells contain different protein translocases These porelike structures transport unfolded polypeptides across membranes and, in case of membrane proteins, laterally integrate them into the lipid bilayer [1]. Examples are the SecY/Sec complexes of the bacterial inner membrane and the endoplasmic reticulum (ER) [2,3], the beta barrel-structured outer membrane translocases of bacteria, mitochondria and chloroplasts [4,5], and the translocases of the mitochondrial inner membrane (TIM23 and TIM22 complexes) [6,7]. These translocases belong to distinct nonrelated protein families and developed independently during evolution. Protein translocation can be mediated by a second group of translocation machineries that do not form defined pores but rather facilitate protein translocation by local distortion
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