Abstract

High risk types of human papillomavirus, such as type 18 (HPV-18), cause cervical carcinoma, one of the most frequent causes of cancer death in women worldwide. DNA replication is one of the central processes in viral maintenance, and the machinery involved is an excellent target for the design of antiviral therapy. The papillomaviral DNA replication initiation protein E1 has origin recognition and ATP-dependent DNA melting and helicase activities, and it consists of a DNA-binding domain and an ATPase/helicase domain. While monomeric in solution, E1 binds DNA as a dimer. Dimerization occurs via an interaction of hydrophobic residues on a single alpha-helix of each monomer. Here we present the crystal structure of the monomeric HPV-18 E1 DNA-binding domain refined to 1.8-A resolution. The structure reveals that the dimerization helix is significantly different from that of bovine papillomavirus type 1 (BPV-1). However, we demonstrate that the analogous residues required for E1 dimerization in BPV-1 and the low risk HPV-11 are also required for HPV-18 E1. We also present evidence that the HPV-18 E1 DNA-binding domain does not share the same nucleotide and amino acid requirements for specific DNA recognition as BPV-1 and HPV-11 E1.

Highlights

  • High risk types of human papillomavirus, such as type 18 (HPV-18), cause cervical carcinoma, one of the most frequent causes of cancer death in women worldwide

  • While the DNA-binding loop was very well ordered in the bovine papillomavirus type 1 (BPV-1) E1-DNA-binding domain (DBD) monomer structure, it is disordered in the structure of the HPV-18 E1-DBD

  • The BPV-1 E1-DBD monomer crystals grew from a high salt condition, and the ions in the solution were bound to the DNAbinding loop, mimicking some of the phosphates of a DNA backbone, as later seen from the co-crystal structure with DNA [15]

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Summary

Introduction

High risk types of human papillomavirus, such as type 18 (HPV-18), cause cervical carcinoma, one of the most frequent causes of cancer death in women worldwide. Overall Structure of the HPV-18 E1-DBD and Comparison with BPV-1 E1-DBD—The minimal stable DBD in BPV-1 E1 (residues 159 –303) was identified by limited proteolysis, determined by gel mobility shift analysis to have DNA binding activity, and shown to possess a fold unique to viral ori-binding proteins (8 –10).

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