Abstract
The whole chloroplast genome nucleotide sequence of Ostrya trichocarpa has been characterized from Illumina pair-end sequencing. The completed genome is 159,122 bp in length, with 121 genes annotated, including 86 protein-coding, 29 tRNA and 6 rRNA genes. The majority of gene occurred as a single copy, while 14 gene species occur in two copies. The circular genome exhibits a typical chloroplast genome structure comprising a large single copy region of 88,158 bp, a small single copy region of 18,758 bp and a pair of inverted repeats of 26,103 and 26,106 bp. The overall AT content of O. trichocarpa chloroplast genome is 63.54%, while the corresponding values of the LSC, SSC and IR regions are 65.73, 62.81 and 60.95%, respectively. Based on the SSR analysis, a total of 85 microsatellites with a length of at least 10 bp were detected in the O. trichocarpa genome. Further, phylogenetic analysis suggested that O. trichocarpa is closely related to Ostrya rehderiana.
Talk to us
Join us for a 30 min session where you can share your feedback and ask us any queries you have
Schedule a callDisclaimer: All third-party content on this website/platform is and will remain the property of their respective owners and is provided on "as is" basis without any warranties, express or implied. Use of third-party content does not indicate any affiliation, sponsorship with or endorsement by them. Any references to third-party content is to identify the corresponding services and shall be considered fair use under The CopyrightLaw.
