Abstract

Analysis of low pathogenic avian influenza (LPAI) viruses circulating in the Netherlands in a previous study revealed associations of specific hemagglutinin (HA) and neuraminidase (NA) subtypes with wild bird or poultry hosts. In this study, we identified putative host associations in LPAI virus internal proteins. We show that LPAI viruses isolated from poultry more frequently carried the allele A variant of the nonstructural protein (NS) gene, compared to wild bird viruses. We determined the susceptibility of chickens to wild bird–associated subtypes H3N8 and H4N6 and poultry-associated subtypes H8N4 and H9N2, carrying either NS allele A or B, in an infection experiment. We observed variations in virus shedding and replication patterns, however, these did not correlate with the predicted wild bird- or poultry-associations of the viruses. The experiment demonstrated that LPAI viruses of wild bird-associated subtypes can replicate in chickens after experimental infection, despite their infrequent detection in poultry. Although the NS1 protein is known to play a role in immune modulation, no differences were detected in the limited innate immune response to LPAI virus infection. This study contributes to a better understanding of the infection dynamics of LPAI viruses in chickens.

Highlights

  • Avian influenza (AI) viruses are influenza A viruses that circulate among a broad range of wild bird species, birds of the orders Anseriformes and Charadriiformes [1], and can infect domestic poultry

  • To identify amino acid residues in the internal proteins that significantly differ between viruses isolated from wild birds and poultry, we applied meta-CATS analysis using the sequences of 162 wild bird viruses and 42 poultry viruses isolated in the Netherlands

  • In a previous study on low pathogenic avian influenza (LPAI) viruses circulating in wild birds and poultry in the Netherlands, we found close host-dependent associations among HA and NA subtypes, suggesting selective virus transmission to poultry [8]

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Summary

Introduction

Avian influenza (AI) viruses are influenza A viruses that circulate among a broad range of wild bird species, birds of the orders Anseriformes (ducks, geese, swans) and Charadriiformes (gulls, terns, waders) [1], and can infect domestic poultry. Most viruses are low pathogenic avian influenza (LPAI) viruses that produce subclinical infections in poultry or, occasionally, cause mild respiratory disease, a reduction in egg production and low mortality [3]. H5 and H7 can mutate into highly pathogenic avian influenza (HPAI) variants that can cause severe progressive disease and high mortality in birds [4]. Outbreaks of HPAI viruses can have serious impact on animal health and economic consequences for the commercial poultry industries. Some strains can be transmitted to humans [5], causing major concern for public health worldwide

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