Abstract
Flash flooding is a major environmental stressor affecting rice production worldwide. DT3 is a drought-tolerant, recurrent parent with a good yield, edible quality, and agronomic traits akin to those of an elite Taiwanese variety, Taiken9 (TK9). Progenies carrying Sub1A can enhance submergence stress tolerance and can be selected using the marker-assisted backcross (MAB) breeding method. For foreground selection, Sub1A and SubAB1 were utilized as markers on the BC2F1, BC3F1, and BC3F2 generations to select the submergence-tolerant gene, Sub1A. Background selection was performed in the Sub1A-BC3F2 genotypes, and the percentages of recurrent parent recovery within individuals ranged from 84.7–99.55%. BC3F3 genotypes (N = 100) were evaluated for agronomic traits, yield, and eating quality. Four of the eleven BC3F4 lines showed good yield, yield component, grain, and eating quality. Four BC3F4 lines, SU39, SU40, SU89, and SU92, exhibited desirable agronomic traits, including grain quality and palatability, consistent with those of DT3. These genotypes displayed a high survival rate between 92 and 96%, much better compared with DT3 with 64%, and demonstrated better drought tolerance compared to IR64 and IR96321-345-240. This study provides an efficient and precise MAB strategy for developing climate-resilient rice varieties with good grain quality for flood-prone regions.
Highlights
Rice (Oryza sativa) is one of the most important cereal crops grown worldwide and is widely cultivated in Asia
The polymorphism was detected between the donor parent, IR96321-315-240, and recurrent parent DT3 with the markers Sub1A1 and Sub1AB1 for the Sub1A gene
Functional marker selection was performed in three generations, including BC2F1, BC3F1, and BC3F2 generation
Summary
Rice (Oryza sativa) is one of the most important cereal crops grown worldwide and is widely cultivated in Asia. It provides approximately 50% of the calories for more than half of the world’s population. By 2050, the global population will reach 9.1 to 9.5 billion, 34 percent higher than that of today [1], and global rice consumption is estimated to increase to 650 million tons over time [2]. 640 million tons are grown in Asia, meeting the global requirement; climate change and heavy rainfall have affected global rice production and threaten long-term food security [3]. The frequency of abnormal floods in Taiwan has increased substantially, in Southeast Asian countries, such as Bangladesh, India, Indonesia, Nepal, and the Philippines [4]. The impact of catastrophic floods on rice production must be addressed urgently
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