Abstract

The Type VI secretion system (T6SS) is a versatile machine that delivers toxins into either eukaryotic or bacterial cells. It thus represents a key player in bacterial pathogenesis and inter-bacterial competition. Schematically, the T6SS can be viewed as a contractile tail structure anchored to the cell envelope. The contraction of the tail sheath propels the inner tube loaded with effectors towards the target cell. The components of the contracted tail sheath are then recycled by the ClpV AAA+ ATPase for a new cycle of tail elongation. The T6SS is widespread in Gram-negative bacteria and most of their genomes carry several copies of T6SS gene clusters, which might be activated in different conditions. Here, we show that the ClpV ATPases encoded within the two T6SS gene clusters of enteroaggregative Escherichia coli are not interchangeable and specifically participate to the activity of their cognate T6SS. Here we show that this specificity is dictated by interaction between the ClpV N-terminal domains and the N-terminal helices of their cognate TssC1 proteins. We also present the crystal structure of the ClpV1 N-terminal domain, alone or in complex with the TssC1 N-terminal peptide, highlighting the commonalities and diversities in the recruitment of ClpV to contracted sheaths.

Highlights

  • Protein is part of the assembly platform composed of the TssEFGK proteins[30,31]

  • Enteroaggregative Escherichia coli strain 17-2 encodes two T6SS gene clusters of the T6SS-1 and T6SS-3 sub-families[44], and it has been shown that the inner tube component Hcp encoded by the T6SS-1 cluster interacts with the sheath component TssB1, but not with TssB2, which is encoded by the T6SS-3 cluster, demonstrating specificity during assembly of the T6SS tails[21]

  • Bacterial genomes may encode several copies of Type VI secretion gene clusters. These gene clusters are usually subjected to different regulatory controls and expressed in different conditions, distinct Type VI secretion machineries may co-exist in the same bacterial cell[1,2]

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Summary

Escherichia coli

Badreddine Douzi[1,2], Yannick R. We present the crystal structure of the ClpV1 N-terminal domain, alone or in complex with the TssC1 N-terminal peptide, highlighting the commonalities and diversities in the recruitment of ClpV to contracted sheaths. Enteroaggregative Escherichia coli strain 17-2 encodes two T6SS gene clusters of the T6SS-1 and T6SS-3 sub-families[44], and it has been shown that the inner tube component Hcp encoded by the T6SS-1 cluster (sci-1) interacts with the sheath component TssB1, but not with TssB2, which is encoded by the T6SS-3 cluster (sci-2), demonstrating specificity during assembly of the T6SS tails[21]. The ClpV1-Nt/TssC1 peptide complex was obtained by mixing the purified ClpV1 N-terminal domain with the peptide at a 1:4 molar ratio in 20 mM Tris-HCl pH8.0, 100 mM NaCl, 5% Glycerol and concentrated using the centricon technology (Millipore, kDa cut-off of 10) to 2 mg/mL. The EAEC ClpV1-Nt and ClpV1-Nt/TssC1 peptide X-ray structures have been deposited in the Protein Data Bank (PDB) under accession numbers 4HH5 and 4HH6, respectively

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