Abstract

The role of stochastic dynamics in protein molecules is considered in order to explain the specific functions of ionic channels in biological membranes: conductivity, selectivity and gating. The events that govern the recognition and transfer of specific ions are very fast and should involve the small-scale dynamics. The essential features of these events may be described on the basis of the Debye model of liquid dielectrics. In contrast, the processes which control the gating (switching the channel from closed to open state) are probably associated with the large-scale fluctuations. Their mechanism is suggested to involve the non-linear interactions between the ion flux and protein conformational modes.

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