Abstract

Food webs, networks of feeding relationships in an ecosystem, provide fundamental insights into mechanisms that determine ecosystem stability and persistence. A standard approach in food-web analysis, and network analysis in general, has been to identify compartments, or modules, defined by many links within compartments and few links between them. This approach can identify large habitat boundaries in the network but may fail to identify other important structures. Empirical analyses of food webs have been further limited by low-resolution data for primary producers. In this paper, we present a Bayesian computational method for identifying group structure using a flexible definition that can describe both functional trophic roles and standard compartments. We apply this method to a newly compiled plant-mammal food web from the Serengeti ecosystem that includes high taxonomic resolution at the plant level, allowing a simultaneous examination of the signature of both habitat and trophic roles in network structure. We find that groups at the plant level reflect habitat structure, coupled at higher trophic levels by groups of herbivores, which are in turn coupled by carnivore groups. Thus the group structure of the Serengeti web represents a mixture of trophic guild structure and spatial pattern, in contrast to the standard compartments typically identified. The network topology supports recent ideas on spatial coupling and energy channels in ecosystems that have been proposed as important for persistence. Furthermore, our Bayesian approach provides a powerful, flexible framework for the study of network structure, and we believe it will prove instrumental in a variety of biological contexts.

Highlights

  • Food webs, networks of feeding relationships in ecosystems, connect the biotic interactions among organisms with energy flows, linking together population dynamics, ecosystem function, and network topology

  • A large literature has considered the presence of compartments of food webs, with early work concluding that compartmentalization results primarily from habitat boundaries, not from dynamical effects [6], continuing theoretical work has shown that compartmentalization can affect stability [7,8]

  • We address the group structure of a newly assembled food web for the large mammals and plants of the Serengeti grassland ecosystem of Tanzania by applying a computational approach to the identification of groups based on Bayesian inference

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Summary

Introduction

Networks of feeding relationships in ecosystems, connect the biotic interactions among organisms with energy flows, linking together population dynamics, ecosystem function, and network topology. One relevant aspect of food webs is the subdivision of species into compartments or modules, a feature that has been proposed to contribute to food web stability by constraining the propagation of disturbances through a network [4] In this definition, compartments are alternately referred to as modules, clusters, or ‘‘communities’’ [5], and are defined by high link density within groups and low link density between them. A large literature has considered the presence of compartments of food webs, with early work concluding that compartmentalization results primarily from habitat boundaries, not from dynamical effects [6], continuing theoretical work has shown that compartmentalization can affect stability [7,8]. One recent study shows that niche structure can result in compartmentalization [9], but the relationship between compartments and spatial habitat structure remains the strongest empirical pattern identified [10,11]

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