Abstract

In north-central Alberta, lodgepole pine (Pinus contorta Dougl. ex Loud. var. latifolia) and jack pine (Pinus banksiana Lamb.) form a mosaic hybrid zone, the spatial extent of which remains poorly defined. We sought to refine the genetic and geographic distribution of this hybrid zone in western North America to provide information important in predicting future risk of mountain pine beetle (Dendroctonus ponderosae Hopkins) outbreaks. We used 29 single nucleotide polymorphism (SNP) markers to discriminate lodgepole pine, jack pine, and their hybrids. We compared and contrasted spatial patterns of hybridization in northern and southern forest zones based on the colonization history of the two species. We found that patterns of introgression were more similar between the zones than expected by chance, but there were significant differences between these regions at specific loci. Using logistic regression, we created a robust predictive model to distinguish among lodgepole pine, jack pine, and their hybrids using a combination of geographic and environmental predictors. Using model selection based on Akaike information criterion, we found that location, elevation, and moisture are important predictors for species class. Quantification of the genetic differences between these two regions, combined with an accurate model for predicting the spatial distribution of lodgepole pine, jack pine, and their hybrids, provides essential information for continued effective management of forest resources.

Highlights

  • The Canadian boreal forest extends from the Yukon and northern British Columbia through to the east coast of Canada (Critchfield 1985)

  • Significant linkage disequilibrium (LD) was present at 11 locus pairs in lodgepole pine, six locus pairs in jack pine, and almost all locus pairs for hybrid individuals

  • Assignments from NEWHYBRIDS were similar to our structure results, with a greater number of hybrids assigned (347 jack pine, 393 lodgepole pine, and 217 hybrids); the mismatches between the two programs were all individuals with split assignment across backcrossed categories

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Summary

Introduction

The Canadian boreal forest extends from the Yukon and northern British Columbia through to the east coast of Canada (Critchfield 1985). It comprises Canada’s primary source of timber (Brandt et al 2013) and includes multiple species of pine, including lodgepole pine Lodgepole pine migrated northward into British Columbia (MacDonald and Cwynar 1985), east into Alberta ϳ10 000 years B.P., and eventually northwest into northern British

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