Abstract

Metastatic breast cancer is usually diagnosed after becoming symptomatic, at which point it is rarely curable. Cell-free circulating tumor DNA (ctDNA) contains tumor-specific chromosomal rearrangements that may be interrogated in blood plasma. We evaluated serial monitoring of ctDNA for earlier detection of metastasis in a retrospective study of 20 patients diagnosed with primary breast cancer and long follow-up. Using an approach combining low-coverage whole-genome sequencing of primary tumors and quantification of tumor-specific rearrangements in plasma by droplet digital PCR, we identify for the first time that ctDNA monitoring is highly accurate for postsurgical discrimination between patients with (93%) and without (100%) eventual clinically detected recurrence. ctDNA-based detection preceded clinical detection of metastasis in 86% of patients with an average lead time of 11 months (range 0–37 months), whereas patients with long-term disease-free survival had undetectable ctDNA postoperatively. ctDNA quantity was predictive of poor survival. These findings establish the rationale for larger validation studies in early breast cancer to evaluate ctDNA as a monitoring tool for early metastasis detection, therapy modification, and to aid in avoidance of overtreatment.

Highlights

  • Metastatic breast cancer is usually diagnosed after becoming symptomatic, at which point it is rarely curable

  • We studied cell-free circulating DNA in patients with primary breast cancer and show that circulating tumor DNA (ctDNA) monitoring is accurate for the detection of occult metastasis

  • Our results are in line with a recent report analyzing ctDNA in metastatic breast cancer patients using similar methods (Dawson et al, 2013) and are a significant finding given that ctDNA levels are considerably lower in earlier stage disease and inherently more difficult to detect than after clinical diagnosis of metastatic disease (Bettegowda et al, 2014)

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Summary

Introduction

Metastatic breast cancer is usually diagnosed after becoming symptomatic, at which point it is rarely curable. Using an approach combining low-coverage whole-genome sequencing of primary tumors and quantification of tumor-specific rearrangements in plasma by droplet digital PCR, we identify for the first time that ctDNA monitoring is highly accurate for postsurgical discrimination between patients with (93%) and without (100%) eventual clinically detected recurrence. CtDNA quantity was predictive of poor survival These findings establish the rationale for larger validation studies in early breast cancer to evaluate ctDNA as a monitoring tool for early metastasis detection, therapy modification, and to aid in avoidance of overtreatment.

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