Abstract

Leaf senescence is an active process with a pivotal impact on plant productivity. It results from extensive signalling cross-talk coordinating environmental factors with intrinsic age-related mechanisms. Although many studies have shown that leaf senescence is affected by a range of external parameters, knowledge about the regulatory systems that govern the interplay between developmental programmes and environmental stress is still vague. Salinity is one of the most important environmental stresses that promote leaf senescence and thus affect crop yield. Improving salt tolerance by avoiding or delaying senescence under stress will therefore play an important role in maintaining high agricultural productivity. Experimental evidence suggests that hydrogen peroxide (H2O2) functions as a common signalling molecule in both developmental and salt-induced leaf senescence. In this study, microarray-based gene expression profiling on Arabidopsis thaliana plants subjected to long-term salinity stress to induce leaf senescence was performed, together with co-expression network analysis for H2O2-responsive genes that are mutually up-regulated by salt induced- and developmental leaf senescence. Promoter analysis of tightly co-expressed genes led to the identification of seven cis-regulatory motifs, three of which were known previously, namely CACGTGT and AAGTCAA, which are associated with reactive oxygen species (ROS)-responsive genes, and CCGCGT, described as a stress-responsive regulatory motif, while the others, namely ACGCGGT, AGCMGNC, GMCACGT, and TCSTYGACG were not characterized previously. These motifs are proposed to be novel elements involved in the H2O2-mediated control of gene expression during salinity stress-triggered and developmental senescence, acting through upstream transcription factors that bind to these sites.

Highlights

  • During the course of senescence, nutrients accumulated in the growing and maturing leaves are exported to actively growing organs such as young leaves, developing fruits, or flowers and storage organs

  • Microarray-based gene expression profiling on Arabidopsis thaliana plants subjected to long-term salinity stress to induce leaf senescence was performed, together with co-expression network analysis for H2O2-responsive genes that are mutually up-regulated by salt induced- and developmental leaf senescence

  • Several studies have been conducted in the past to profile the transcriptomes of salt-stressed Arabidopsis plants and during developmental senescence, to the authors’ knowledge, so far no attempt has been undertaken to identify regulatory components allowing cross-talk between saltinduced and developmental senescence

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Summary

Introduction

During the course of senescence, nutrients accumulated in the growing and maturing leaves are exported to actively growing organs such as young leaves, developing fruits, or flowers and storage organs. This mobilization is continued until most of the nutrients are removed from the senescing leaves (Hörtensteiner and Feller, 2002). As senescence can normally not be induced in young leaves of Arabidopsis, it was proposed that age-related changes (ARCs) are needed to allow the execution of senescence at a later developmental stage of a leaf (Jibran et al, 2013). ARCs occurring at the level of various phytohormones (i.e. ethylene, cytokinins, jasmonic acid, and salicylic acid), metabolites (such as sugars), and active forms of oxygen [reactive oxygen species (ROS)] may contribute to establish a senescence-competent status of the leaf (Guo and Gan, 2005)

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