Abstract

Describing and quantifying vascular canal orientation and volume of osteocyte lacunae in bone is important in studies of bone growth, mechanics, health and disease. It is also an important element in analysing fossil bone in palaeohistology, key to understanding the growth, life and death of extinct animals. Often, bone microstructure is studied using two‐dimensional (2D) sections, and three‐dimensional (3D) shape and orientation of structures are estimated by modelling the structures using idealised geometries based on information from their cross sections. However, these methods rely on structures meeting strict geometric assumptions. Recently, 3D methods have been proposed which could provide a more accurate and robust approach to bone histology, but these have not been tested in direct comparison with their 2D counterparts in terms of accuracy and sensitivity to deviations from model assumptions. We compared 2D and 3D methodologies for estimating key microstructural traits using a combination of experimental and idealised test data sets. We generated populations of cylinders (canals) and ellipsoids (osteocyte lacunae), varying the cross‐sectional aspect ratios of cylinders and orientation of ellipsoids to test sensitivity to deviations from cylindricality and longitudinal orientation, respectively. Using published methods, based on 2D sections and 3D data sets, we estimated cylinder orientation and ellipsoid volume. We applied the same methods to six CT data sets of duck cortical bone, using the full volumes for 3D measurements and single CT slices to represent 2D sections. Using in silico test data sets that did deviate from ideal cylinders and ellipsoids resulted in inaccurate estimates of cylinder or canal orientation, and reduced accuracy in estimates of ellipsoid and lacunar volume. These results highlight the importance of using appropriate 3D imaging and quantitative methods for quantifying volume and orientation of 3D structures and offer approaches to significantly enhance our understanding of bone physiology based on accurate measures for bone microstructures.

Highlights

  • Bone histology is part of the daily armoury in biomedical research and, the study of bone histology in extant and fossil animals has led to substantial shifts in the way we view extinct species and the evolution of key biological traits such as growth rate, metabolic rate, and locomotion

  • There is a clear need for 3D imaging for the accurate estimation of canal orientation and osteocyte lacunar volume

  • Estimates based on 2D sections depend on strict geometric assumptions seldom met in biological and non-biological samples, and measuring shape and orientation is often impossible from 2D data

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Summary

Introduction

Bone histology is part of the daily armoury in biomedical research and, the study of bone histology in extant and fossil animals has led to substantial shifts in the way we view extinct species and the evolution of key biological traits such as growth rate, metabolic rate, and locomotion. Studying bone histology in extant animals to discover correlations between intracortical bone microstructure and a variety of biological traits, from growth rate to lifestyle, has significantly enhanced our understanding of extinct animals and evolution (Erickson et al, 2009, Chinsamy-Turan and Hurum, 2005, Padian and Lamm, 2013, Erickson, 2014). Histological descriptions of new fossils are typically qualitative, placing observed tissues into a set of bone types (De Ricqles, 1975) and relating these to traits, such as ’rapid growth’ or occasionally more specific growth rates (de Margerie et al, 2002). Well-established, the categories used to define the bone types do not fully capture the continuous nature of spatial and temporal variation in bone structure (de Boef and Larsson, 2007) and quantitative approaches are crucial to standardisation and robust testing of hypotheses

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