Abstract

Understanding the genetic background of drought tolerance in common bean (Phaseolus vulgaris L.) can aid its resilience improvement. However, drought response studies in large seeded genotypes of Andean origin are insufficient. Here, a novel Andean intra-gene pool genetic linkage map was created for quantitative trait locus (QTL) mapping of drought-responsive traits in a recombinant inbred line population from a cross of two cultivars differing in their response to drought. Single environment and QTL × environment analysis revealed 49 QTLs for physiology, phenology, and yield-associated traits under control and/or drought conditions. Notable QTLs for days to flowering (Df1.1 and Df 1.2) were co-localized with a putative QTL for days to pods (Dp1.1) on linkage group 1, suggesting pleiotropy for genes controlling them. QTLs with stable effects for number of seeds per pod (Sp2.1) in both seasons and putative water potential QTLs (Wp1.1, Wp5.1) were detected. Detected QTLs were validated by projection on common bean consensus linkage map. Drought response-associated QTLs identified in the novel Andean recombinant inbred line (RIL) population confirmed the potential of Andean germplasm in improving drought tolerance in common bean. Yield-associated QTLs Syp1.1, Syp1.2, and Sp2.1 in particular could be useful for marker-assisted selection for higher yield of Andean common beans.

Highlights

  • Common bean (Phaseolus vulgaris L.) is an important legume crop for human consumption [1].During the growing season it requires between 300 and 500 mm of rain for optimal development and production of seed according to its genetic potential [1,2]

  • A total of 447 simple sequence repeat (SSR) primer pairs developed for common bean and 256 amplified fragment length polymorphism (AFLP) combinations were screened for polymorphisms in the parental genotypes

  • An Andean intra-gene pool genetic map integrating two molecular marker types was created in order to explore the potential of common bean genotypes of Andean origin as a source of drought tolerance traits

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Summary

Introduction

Common bean (Phaseolus vulgaris L.) is an important legume crop for human consumption [1].During the growing season it requires between 300 and 500 mm of rain for optimal development and production of seed according to its genetic potential [1,2]. Common bean (Phaseolus vulgaris L.) is an important legume crop for human consumption [1]. Water deficit results in a reduction of quality and quantity of yield and is problematic especially in drought-endemic regions in developing countries [2]. Due to ongoing climate changes, traits associated with drought tolerance are being introduced in many common bean breeding programs in Europe and worldwide [3]. Adaption of plants to drought stress can be a result of drought escape or different drought tolerance mechanisms. The plant can escape the drought by completing their life cycle before the onset of severe stress conditions, which is enabled by early maturation and seed development characterized by increased mobilization of carbon to the seed.

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