Privacy-Preserving Collaborative Analytics on Medical Time Series Data

Abstract

Medical time series data analytics based on dynamic time warping (DTW) greatly benefits modern medical research. Driven by the distributed nature of medical data, the collaboration of multiple healthcare institutions is usually necessary for a sound medical conclusion. Among others, a typical use case is disease screening for public health, where multiple healthcare institutions wish to collaboratively detect over their joint datasets the patients whose medical records have similar features to the given query samples. However, sharing the medical data faces critical privacy obstacles with the increasingly strict legal regulations on data privacy. In this article, we present the design of a novel system enabling privacy-preserving DTW-based analytics on distributed medical time series datasets. Our system is built from a delicate synergy of techniques from both cryptography and data mining domains, where the key idea is to leverage observations on the advancements in plaintext DTW analytics (e.g., clustering and pruning) to facilitate the scalable computation in the ciphertext domain, through our tailored security design. Extensive experiments over real medical time series datasets demonstrate the promising performance of our system, e.g., our system is able to process a secure DTW query computation over 15K time series sequences in 34 minutes.