Abstract

We characterize changes in isomeric states of the retinylidene chromophore during light-dark adaptation and photochemical reactions of Anabaena (Nostoc) sp. PCC7120 sensory rhodopsin (ASR). The results show that ASR represents a new type of microbial rhodopsin with a number of unusual characteristics. The three most striking are: (i) a primarily all-trans configuration of retinal in the dark-adapted state and (ii) a primarily 13-cis light-adapted state with a blue-shifted and lower extinction absorption spectrum, opposite of the case of bacteriorhodopsin; and (iii) efficient reversible light-induced interconversion between the 13-cis and all-trans unphotolyzed states of the pigment. The relative amount of ASR with cis and trans chromophore forms depends on the wavelength of illumination, providing a mechanism for single-pigment color sensing analogous to that of phytochrome pigments. In addition ASR exhibits unusually slow formation of L-like and M-like intermediates, with a dominant accumulation of M during the photocycle. Co-expression of ASR with its putative cytoplasmic transducer protein shifts the absorption maximum and strongly decreases the rate of dark adaptation of ASR, confirming interaction between the two proteins. Thus ASR, the first non-haloarchaeal sensory rhodopsin characterized, demonstrates the diversity of photochemistry of microbial rhodopsins. Its photochromic properties and the position of its two ground state absorption maxima suggest it as a candidate for controlling differential photosynthetic light-harvesting pigment synthesis (chromatic adaptation) or other color-sensitive physiological responses in Anabaena cells.

Highlights

  • We characterize changes in isomeric states of the retinylidene chromophore during light-dark adaptation and photochemical reactions of Anabaena (Nostoc) sp

  • The results show that ASR represents a new type of microbial rhodopsin with a number of unusual characteristics

  • The relative amount of ASR with cis and trans chromophore forms depends on the wavelength of illumination, providing a mechanism for single-pigment color sensing analogous to that of phytochrome pigments

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Summary

Introduction

We characterize changes in isomeric states of the retinylidene chromophore during light-dark adaptation and photochemical reactions of Anabaena (Nostoc) sp. Most of our knowledge of properties of type 1 rhodopsins (such as isomeric configuration and conformation of their chromophore, photochemical reactions, lightinduced conformational changes in the protein, and function) has been obtained from these four related pigments from H. salinarum. Anabaena sensory rhodopsin (ASR) is well suited for exploration [5] It is the first known prokaryotic sensory representative outside of haloarchaea, and its function appears to involve activation of a cytoplasmic transducer, unlike SRI and SRII, which transmit signals to other integral membrane proteins (methyl-accepting taxis transducers) in a molecular complex. In this study we present analysis of light-dark adaptation in ASR, which shows that the pigment undergoes inverse (as compared with BR) changes in isomeric configuration of its retinal chromophore. The results reveal fundamental differences from the haloarchaeal rhodopsins in these basic properties and illustrate the intriguing diversity in photochemistry of the rapidly expanding type l family

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