Abstract

The human pathogens of the Leishmania and Trypanosoma genera compartmentalize glycolytic and other key metabolic pathways in unique subcellular microbodies called glycosomes, organelles related to the peroxisomes of mammals and yeast. The molecular machinery that carries out the specific targeting of glycosomal proteins to the organelle has not been characterized, although the bulk of glycosomal proteins contain the COOH-terminal tripeptide glycosomal peroxisomal targeting signal-1 (PTS-1) similar to the mammalian and fungal peroxisomal targeting signal. To characterize the mechanisms of glycosomal targeting, the gene encoding PEX5, designated LdPEX5, has been isolated from Leishmania donovani. LdPEX5 encodes a 625-amino acid protein with a molecular mass of 69.7 kDa. Like its homologs in yeast and humans, LdPEX5 predicts a protein with seven copies of a tetratricopeptide repeat in its COOH-terminal half proposed to mediate PTS-1 binding and three copies of a WXXX(Y/F) motif in its NH(2) terminus conjectured to be essential for protein translocation into the organelle. LdPEX5 was overexpressed in Escherichia coli and purified to homogeneity for binding experiments and generation of antibodies. Recombinant LdPEX5 bound xanthine phosphoribosyltransferase (XPRT), a PTS-1 containing glycosomal protein with a K(D) of 4.2 nm, but did not bind an XPRT in which the PTS-1 had been deleted. Moreover, binding studies with the COOH-terminal half of the LdPEX5 confirmed that this portion of the PEX5 protein was capable of binding the XPRT PTS-1 with an affinity of 17.3 nm. Confocal microsocopy revealed that LdPEX5 was predominantly in the cytosolic milieu, and genetic analysis implied that LdPEX5 was an essential gene.

Highlights

  • Parasites of the Trypansomatidae family, including the human pathogens of the Leishmania and Trypanosoma genera, are evolutionarily primitive eukaryotes that exhibit a variety of molecular, biochemical, and cell biological characteristics peculiar to these organisms

  • Like its homologs in yeast and humans, L. donovani PEX5 (LdPEX5) predicts a protein with seven copies of a tetratricopeptide repeat in its COOH-terminal half proposed to mediate peroxisomal targeting signal-1 (PTS-1) binding and three copies of a WXXX(Y/F) motif in its NH2 terminus conjectured to be essential for protein translocation into the organelle

  • A multiple sequence alignment of the human, Saccharomyces cerevisiae, and Caenorhabditis elegans peroxin 5 (PEX5) proteins revealed two regions of marginally conserved amino acid sequence, corresponding to residues 342–346 (QAENE) and 488 – 494 (WNKLGAT) of the human PEX5, that were used to design degenerate polymerase chain reaction (PCR) primers that accommodated for the codon bias of Leishmania [37]

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Summary

Introduction

Parasites of the Trypansomatidae family, including the human pathogens of the Leishmania and Trypanosoma genera, are evolutionarily primitive eukaryotes that exhibit a variety of molecular, biochemical, and cell biological characteristics peculiar to these organisms. Binding studies with the COOH-terminal half of the LdPEX5 confirmed that this portion of the PEX5 protein was capable of binding the XPRT PTS-1 with an affinity of 17.3 nM.

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