Abstract
The C1q superfamily includes proteins involved in innate immunity, insulin sensitivity, biomineralization and more. Among these proteins is otolin-1, which is a collagen-like protein that forms a scaffold for the biomineralization of inner ear stones in vertebrates. The globular C1q-like domain (gC1q), which is the most conserved part of otolin-1, binds Ca2+ and stabilizes its collagen-like triple helix. The molecular details of the assembly of gC1q otolin-1 trimers are not known. Here, we substituted putative Ca2+-binding acidic residues of gC1q otolin-1 with alanine to analyse how alanine influences the formation of gC1q trimers. We used human and zebrafish gC1q otolin-1 to assess how evolutionary changes affected the function of the protein. Surprisingly, the mutated forms of gC1q otolin-1 trimerized even in the absence of Ca2+, although they were less stable than native proteins saturated with Ca2+. We also found that the zebrafish gC1q domain was less stable than the human homologue under all tested conditions and became stabilized at higher concentrations of Ca2+, which showed that specific interactions leading to the neutralization of the negative charge at the axis of a gC1q trimer by Ca2+ are required for the trimers to form. Moreover, human gC1q otolin-1 seems to be optimized to function at lower concentrations of Ca2+, which is consistent with reported Ca2+ concentrations in the endolymphs of fish and mammals. Our results allow us to explain the molecular mechanism of assembly of proteins from the C1q superfamily, the modulating role of Ca2+ and expand the knowledge of biomineralization of vertebrate inner ear stones: otoliths and otoconia.
Highlights
The C1q superfamily includes proteins involved in innate immunity, insulin sensitivity, biomineralization and more
We used data acquired from the Ensembl database and predictions in silico to screen currently known missense single nucleotide polymorphisms (SNPs) of hOtolC1q and dOtolC1q for their abundance and possible effect on protein function and stability
We found a single SNP in a region coding hOtolC1q, in which glutamate-470 is replaced by alanine (E470A) due to a substitution of adenine with cytosine
Summary
The C1q superfamily includes proteins involved in innate immunity, insulin sensitivity, biomineralization and more. CD allowed us to assess secondary structure changes accompanied by binding of Ca2+ and Tb3+ to mutated hOtolC1q and dOtolC1q In the case of hOtolC1q, spectra collected for proteins depleted from C a2+ by 1 mM EDTA indicate that mutations involving the C a2+ binding site led to changes in β-structure content (Fig. 3a).
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