Abstract

Mitochondria, the energy stations of the cell, are the only extranuclear organelles, containing their own (mitochondrial) DNA (mtDNA) and the protein synthesizing machinery. The location of mtDNA in close proximity to the oxidative phosphorylation system of the inner mitochondrial membrane, the main source of reactive oxygen species (ROS), is an important factor responsible for its much higher mutation rate than nuclear DNA. Being more vulnerable to damage than nuclear DNA, mtDNA accumulates mutations, crucial for the development of mitochondrial dysfunction playing a key role in the pathogenesis of various diseases. Good evidence exists that some mtDNA mutations are associated with increased risk of Parkinson’s disease (PD), the movement disorder resulted from the degenerative loss of dopaminergic neurons of substantia nigra. Although their direct impact on mitochondrial function/dysfunction needs further investigation, results of various studies performed using cells isolated from PD patients or their mitochondria (cybrids) suggest their functional importance. Studies involving mtDNA mutator mice also demonstrated the importance of mtDNA deletions, which could also originate from abnormalities induced by mutations in nuclear encoded proteins needed for mtDNA replication (e.g., polymerase γ). However, proteomic studies revealed only a few mitochondrial proteins encoded by mtDNA which were downregulated in various PD models. This suggests nuclear suppression of the mitochondrial defects, which obviously involve cross-talk between nuclear and mitochondrial genomes for maintenance of mitochondrial functioning.

Highlights

  • More than two centuries ago, James Parkinson described in his famous monograph “An Essay of the Shaking Palsy” (1817) the main clinical symptoms of one of the most widespread age-related neurodegenerative diseases known as Parkinson’s disease (PD) [1,2]

  • Despite significant variations in the number of identified mitochondrial DNA (mtDNA) binding proteins and critical evaluation of the methodical approaches used by different groups (e.g., [39,46]), these results indicate a rather tight association of nucleoids with the inner mitochondrial membrane, where the major sources of reactive oxygen species (ROS) are located

  • We suggest that the selection of appropriate experimental protocols appears to play an important role especially if we take into consideration that the mtDNA damage and mtDNA copy number demonstrated different recoveries after the ROS-dependent treatment of cells

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Summary

Introduction

More than two centuries ago, James Parkinson described in his famous monograph “An Essay of the Shaking Palsy” (1817) the main clinical symptoms of one of the most widespread age-related neurodegenerative diseases known as Parkinson’s disease (PD) [1,2]. The development of various experimental models started in the second half of the last century and the genetic analysis of PD patients revealed molecular mechanisms crucial for important aspects of various forms of PD (both sporadic and familial) [1,2,3]. In addition to complex I defects found mainly in substantia nigra of aged and PD patients, In addition to complex I defects found mainly in substantia nigra of aged and PD patients, deficient deficient complex I activities have been found in platelets, skeletal muscles [7,8,9,10], skin complex I activities have been found in platelets, skeletal muscles [7,8,9,10], skin fibroblasts [11] from fibroblasts [11] from PD patients, but not in lymphocytes [10] This suggests that the complex I defect.

Mitochondrial DNA
MtDNA Oxidation and Repair Mechanisms
Age-Related Changes in mtDNA
MtDNA Mutations
Substantia Nigra Samples from PD Patients
Other Cells from PD Patients
MPTP-Induced Parkinsonism
Rotenone-Induced Parkinsonism
Polg Mutator Mice
Findings
Conclusions
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