Abstract

Native top-down mass spectrometry is a fast, robust biophysical technique that can provide molecular-scale information on the interaction between proteins or peptides and ligands, including metal cations. Here we have analyzed complexes of the full-length amyloid β (1-42) monomer with a range of (patho)physiologically relevant metal cations using native Fourier transform ion cyclotron resonance mass spectrometry and three different fragmentation methods—collision-induced dissociation, electron capture dissociation, and infrared multiphoton dissociation—all yielding consistent results. Amyloid β is of particular interest as its oligomerization and aggregation are major events in the etiology of Alzheimer’s disease, and it is known that interactions between the peptide and bioavailable metal cations have the potential to significantly damage neurons. Those metals which exhibited the strongest binding to the peptide (Cu2+, Co2+, Ni2+) all shared a very similar binding region containing two of the histidine residues near the N-terminus (His6, His13). Notably, Fe3+ bound to the peptide only when stabilized toward hydrolysis, aggregation, and precipitation by a chelating ligand, binding in the region between Ser8 and Gly25. We also identified two additional binding regions near the flexible, hydrophobic C-terminus, where other metals (Mg2+, Ca2+, Mn2+, Na+, and K+) bound more weakly—one centered on Leu34, and one on Gly38. Unexpectedly, collisional activation of the complex formed between the peptide and [CoIII(NH3)6]3+ induced gas-phase reduction of the metal to CoII, allowing the peptide to fragment via radical-based dissociation pathways. This work demonstrates how native mass spectrometry can provide new insights into the interactions between amyloid β and metal cations.

Highlights

  • G aining insight into protein-protein, protein-ligand, and protein-metal interactions at the molecular level is critical for understanding the biological function of proteins

  • We briefly investigated the use of different buffers to study amyloid-metal interactions by mass spectrometry

  • Most literature reports do not employ mass spectrometry (MS) and have used conventional molecular biology buffers, such as phosphate-buffered saline (PBS), and performing MS using these buffers would have the benefit of eliminating one potential source of discrepancy when comparing our results to the literature

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Summary

Introduction

G aining insight into protein-protein, protein-ligand, and protein-metal interactions at the molecular level is critical for understanding the biological function of proteins. We have used electron capture dissociation (ECD), infrared multiphoton dissociation (IRMPD), and collision-induced dissociation (CID), to determine the peptide-metal interaction sites. In this type of “native topdown” study [14], it is always a concern whether the binding site remains the same during the dissociation process. There is widespread interest in the possible involvement of Zn2+ and Al3+ in neurodegeneration on account of their known or suspected dysregulation functions in Alzheimer’s disease, we were unable to obtain consistent MS data for binding of these metal cations to amyloid β (1-42), and so no results are reported here We believe this is due to their complicated hydrolytic chemistry at physiological pH (formation of hydroxide-bridged oligomers, etc.), as we will illustrate for Fe3+. Transmission electron microscopy (TEM) images were acquired using a JEOL 2010 microscope operated at 200 kV, and negative staining was performed using uranyl acetate

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