Abstract

Isoprene, a volatile hydrocarbon emitted largely by plants, plays an important role in regulating the climate in diverse ways, such as reacting with free radicals in the atmosphere to produce greenhouse gases and pollutants. Isoprene is both deposited and formed in soil, where it can be consumed by some soil microbes, although much remains to be understood about isoprene consumption in tropical soils. In this study, isoprene-degrading bacteria from soils associated with tropical plants were investigated by cultivation and cultivation-independent approaches. Soil samples were taken from beneath selected framework forest trees and economic crops at different seasons, and isoprene degradation in soil microcosms was measured after 96 h of incubation. Isoprene losses were 4–31% and 15–52% in soils subjected to a lower (7.2 × 105 ppbv) and a higher (7.2 × 106 ppbv) concentration of isoprene, respectively. Sequencing of 16S rRNA genes revealed that bacterial communities in soil varied significantly across plant categories (framework trees versus economic crops) and the presence of isoprene, but not with isoprene concentration or season. Eight isoprene-degrading bacterial strains were isolated from the soils and, among these, four belong to the genera Ochrobactrum, Friedmanniella, Isoptericola and Cellulosimicrobium, which have not been previously shown to degrade isoprene.

Highlights

  • IntroductionIsoprene (C5 H8 ) is the second most abundant natural hydrocarbon in the atmosphere after methane [1]

  • The percentage losses of isoprene over 96 h were between 4.4% and 30.9% for the soil samples incubated with isoprene at the lower concentration, and between 15.4% and 51.6% for samples incubated with isoprene at the higher concentration (Figure 1)

  • After combining seasonal and concentration data, only rubber-tree soil slurries had significantly lower isoprene loss compared with the other five tree species (Anova Tukey HSD test; p < 0.05). These findings reveal that soil associated with various types of trees had the capacity for isoprene consumption, which suggests widespread distribution of isoprene degraders in tropical soils, as seen for other soil types [13,14,19,20]

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Summary

Introduction

Isoprene (C5 H8 ) is the second most abundant natural hydrocarbon in the atmosphere after methane [1]. It is estimated that approximately 500 million tonnes of isoprene are emitted into the atmosphere annually, mainly from tropical forests [2]. Isoprene is a highly reactive volatile organic compound, which can bond with free radicals and react with nitrogen oxides to, inter alia, form ozone, which is a powerful greenhouse gas [3]. Tropospheric ozone can have an adverse effect on the health of humans and animals, especially on the respiratory system, and is potentially harmful to all other organisms, biodiversity and ecosystems [4]. Tropospheric ozone can have an adverse effect on the health of humans and animals, especially on the respiratory system, and is potentially harmful to all other organisms, biodiversity and ecosystems [4]. 4.0/).

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