Abstract

BackgroundTrichoderma spp. are effective biocontrol agents for many plant pathogens, thus the mechanism of Trichoderma-induced plant resistance is not fully understood. In this study, a novel Trichoderma strain was identified, which could promote plant growth and reduce the disease index of gray mold caused by Botrytis cinerea in cucumber. To assess the impact of Trichoderma inoculation on the plant response, a multi-omics approach was performed in the Trichoderma-inoculated cucumber plants through the analyses of the plant transcriptome, proteome, and phytohormone content.ResultsA novel Trichoderma strain was identified by morphological and molecular analysis, here named T. longibrachiatum H9. Inoculation of T. longibrachiatum H9 to cucumber roots promoted plant growth in terms of root length, plant height, and fresh weight. Root colonization of T. longibrachiatum H9 in the outer layer of epidermis significantly inhibited the foliar pathogen B. cinerea infection in cucumber. The plant transcriptome and proteome analyses indicated that a large number of differentially expressed genes (DEGs) and differentially expressed proteins (DEPs) were identified in cucumber plants 96 h post T. longibrachiatum H9 inoculation. Up-regulated DEGs and DEPs were mainly associated with defense/stress processes, secondary metabolism, and phytohormone synthesis and signaling, including jasmonic acid (JA), ethylene (ET) and salicylic acid (SA), in the T. longibrachiatum H9-inoculated cucumber plants in comparison to untreated plants. Moreover, the JA and SA contents significantly increased in cucumber plants with T. longibrachiatum H9 inoculation.ConclusionsApplication of T. longibrachiatum H9 to the roots of cucumber plants effectively promoted plant growth and significantly reduced the disease index of gray mold caused by B. cinerea. The analyses of the plant transcriptome, proteome and phytohormone content demonstrated that T. longibrachiatum H9 mediated plant systemic resistance to B. cinerea challenge through the activation of signaling pathways associated with the phytohormones JA/ET and SA in cucumber.

Highlights

  • Trichoderma spp. are effective biocontrol agents for many plant pathogens, the mechanism of Trichoderma-induced plant resistance is not fully understood

  • Morphological and molecular identification of the Trichoderma H9 strain The Trichoderma H9 strain was obtained from the soil near a cucumber plant and exhibited the typical morphological features of T. longibrachiatum based on the monograph of Gams and Bisset [36]

  • Molecular identification based on ITS and TEF-1α genes revealed that this H9 strain shared the highest homology in the phylogeny and clustered together with T. longibrachiatum strains, whose species identity has been confirmed by phylogenetic analysis [43,44,45,46,47]

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Summary

Introduction

Trichoderma spp. are effective biocontrol agents for many plant pathogens, the mechanism of Trichoderma-induced plant resistance is not fully understood. Trichoderma spp. are plant growth-promoting fungi that have been found to have great potential for the control of gray mold caused by B. cinerea [3, 4]. The mechanism of induced plant resistance is not fully understood, the plant response to Trichoderma spp. has been studied at the physiological and biochemical levels. These studies have shown that colonization by Trichoderma spp. triggers a series of plant responses that may enhance the defensive capacity of the plant. Plant hormone signaling may modulate the defense network by translating Trichoderma-induced upstream signaling events into the activation of defense responses

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