Abstract

Transcription activators often recruit promoter-targeted assembly of a pre-initiation complex; many repressors antagonize recruitment. These activities can involve direct interactions with proteins in the pre-initiation complex. We used an optimized yeast two-hybrid system to screen mouse pregnancy-associated libraries for proteins that interact with TATA-binding protein (TBP). Screens revealed an interaction between TBP and a single member of the zinc finger family of transcription factors, ZFP523. Two members of the protein inhibitor of activated STAT (PIAS) family, PIAS1 and PIAS3, also interacted with TBP in screens. Endogenous PIAS1 and TBP co-immunoprecipitated from nuclear extracts, suggesting the interaction occurred in vivo. In vitro-translated PIAS1 and TBP co-immunoprecipitated, which indicated that other nuclear proteins were not required for the interaction. Deletion analysis mapped the PIAS-interacting domain of TBP to the conserved TBP(CORE) and the TBP-interacting domain on PIAS1 to a 39-amino acid C-terminal region. Mammals issue seven known PIAS proteins from four pias genes, pias1, pias3, piasx, and piasy, each with different cell type-specific expression patterns; the TBP-interacting domain reported here is the only part of the PIAS C-terminal region shared by all seven PIAS proteins. Direct analyses indicated that PIASx and PIASy also interacted with TBP. Our results suggest that all PIAS proteins might mediate situation-specific regulatory signaling at the TBP interface and that previously unknown levels of complexity could exist in the gene regulatory interplay between TBP, PIAS proteins, ZFP523, and other transcription factors.

Highlights

  • Using PIAS1 as a family representative, we show that that protein inhibitor of activated signal transducer and activator of transcription (STAT) (PIAS)/TATA-binding protein (TBP) interaction involves a conserved 39-amino acid region within the PIAS C-terminal region and very likely occurs through direct contacts between PIAS and TBP proteins

  • TBP is a central player in transcription initiation whose activity is controlled by interactions with activators, repressors, and other transcriptional regulatory proteins

  • In agreement with the recently reported interaction between TBP and human ZNF76 [11], we show that mouse zinc finger protein 523 (ZFP523), which shares 92% amino acid identity with ZNF76, interacts with TBP (Figs. 2 and 3B)

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Summary

Oligonucleotide primer sequences for construction of bait and prey cDNAs

TBP-N-start TBP-N-end TBP-C-start TBP-C-end TBP-C160-forward primer TBP-C201-forward primer TBP-C210-reverse primer TBP-C251-forward primer TBP-C263-reverse primer PIASx␤-forward primer PIASx␤-reverse primer PIASy-forward primer PIASy-reverse primer PIAS1-C452-reverse primer PIAS1-C491-reverse primer PIAS1-C562-reverse primer PIAS1-C605-reverse primer PIAS1-N1-forward primer PIAS1-N484-forward primer PIAS1-N555-forward primer PIAS1-N598-forward primer pGADT7-reverse primer. 5Ј-atcgtcgactatggaccagaacaacagccttcca-3Ј 5Ј-tatgcggccgcccagagctctcagaagctggtgt-3Ј 5Ј-tatgtcgaccaccatggcgagctctggaattgtaccgcag-3Ј 5Ј-tatgcggccgcgtggtcttcctgaatccctttaa-3Ј 5Ј-atctcgagcattgcacttcgtgcaagaaatgctg-3Ј 5Ј-tatgtcgaccaccatggccaagagtgaagaacaatcc-3Ј 5Ј-tatgcggccgcgctagtctggattgttcttcactc-3Ј 5Ј-tatgtcgaccaccatggtgctgacccaccagcagttc-3Ј 5Ј-tatgcggccgctctggctcatagctactgaact-3Ј 5Ј-tatgtcgaccatgaatatggtttctagttttagggtttc-3Ј 5Ј-tatgcggccgcctttagtccaaagagatgatgtc-3Ј 5Ј-tatgtcgacgctagtggccaagatggc-3Ј 5Ј-tatgcggccgctcagcacgcgggcaccaggcct-3Ј 5Ј-tatgcggccgcctcgaggtatttgaggactggttgtggg-3Ј 5Ј-tatgcggccgcacttagtggtgacgtaggagacag-3Ј 5Ј-tatgcggccgctagcagggaggtgttgtaatg-3Ј 5Ј-tatgcggccgcgttggtggctggcagagatgtgct-3Ј 5Ј-tatgtcgaccatggcggacagtgcggaactaaagcaaatggttatgagc-3Ј 5Ј-tatgtcgaccctgtctcctacgtcaccactaagt-3Ј 5Ј-tatgtcgacgcattacaacacctccctgctag-3Ј 5Ј-tatgtcgacgagcacatctctgccagccaccaa-3Ј 5Ј-gaaagaaattgagatggtgcac-3Ј a Endogenous protein-coding sequences are in bold and engineered restriction sites are in italics. In the C termini of all PIAS proteins except PIAS␥. The function of this region is unknown [16]. We show that mouse TBP interacts with ZFP523, the mouse ortholog of human ZNF76. We report the novel interaction of TBP with PIAS1, PIAS3, PIASx, and PIASy proteins. The TBP/PIAS interaction is shown to occur between in vitro translated proteins, suggesting the interaction is direct, and it is detected between endogenous proteins in nuclear extracts, suggesting it occurs in vivo. Our results suggest that PIAS proteins might modulate transcriptional signaling at the TBP interface

EXPERIMENTAL PROCEDURES
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