Abstract

The molecular interactions driving reactive center loop (RCL) insertion are of considerable interest in gaining a better understanding of the serpin inhibitory mechanism. Previous studies have suggested that interactions in the proximal hinge/breach region may be critical determinants of RCL insertion in serpins. In this study, conformational and functional changes in plasminogen activator inhibitor-2 (PAI-2) following incubation with a panel of synthetic RCL peptides indicated that the P14 residue is critical for RCL insertion, and hence inhibitory activity, in PAI-2. Only RCL peptides with a P14 threonine were able to induce the stressed to relaxed transition and abolish inhibitory activity in PAI-2, indicating that RCL insertion into beta-sheet A of PAI-2 is dependent upon this residue. The recently solved crystal structure of relaxed PAI-2 (PAI-2.RCL peptide complex) allowed detailed analysis of molecular interactions involving P14 related to RCL insertion. Of most interest is the rearrangement of hydrogen bonding around the breach region that accompanies the stressed to relaxed transition, in particular the formation of a side chain hydrogen bond between the threonine at P14 and an adjacent tyrosine on strand 2 of beta-sheet B in relaxed PAI-2. Structural alignment of known serpin sequences showed that this pairing (or the equivalent serine/threonine pairing) is highly conserved ( approximately 87%) in inhibitory serpins and may represent a general structural basis for serpin inhibitory activity.

Highlights

  • The recent discovery of the crystallographic structure of the serpin-protease complex [1] confirms that the serpin inhibitory mechanism is dependent upon insertion of RCL1 into ␤-sheet A and the conformational changes associated with the stressed to relaxed (S 3 R) transition

  • reactive center loop (RCL) peptides with a P14 threonine were able to induce the stressed to relaxed transition and abolish inhibitory activity in plasminogen activator inhibitor-2 (PAI-2), indicating that RCL insertion into ␤-sheet A of PAI-2 is dependent upon this residue

  • As the scrambled peptide has no effect on PAI-2 inhibitory activity and PAI-2 is completely unfolded in 8 M urea [3], this result may be an artifact of an unusual interaction between denatured PAI-2 and the scrambled peptide

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Summary

Introduction

The recent discovery of the crystallographic structure of the serpin-protease complex [1] confirms that the serpin inhibitory mechanism is dependent upon insertion of RCL1 into ␤-sheet A and the conformational changes associated with the stressed to relaxed (S 3 R) transition. Conformational and functional changes in plasminogen activator inhibitor-2 (PAI-2) following incubation with a panel of synthetic RCL peptides indicated that the P14 residue is critical for RCL insertion, and inhibitory activity, in PAI-2.

Results
Conclusion

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