Abstract

Effective connectivity analysis is a popular approach in computational neuroscience, whereby one seeks to infer a network of directed edges between neural variables (e.g. voxels or regions in fMRI, or reconstructed source time series in MEG data) which can explain their observed time-series dynamics. This is an important approach in understanding brain function, contrasting with functional connectivity analysis in being directed and dynamic, and with structural connectivity analysis in not requiring interventions and in being task-modulated. In particular, effective connectivity analysis seeks to find a minimal circuit model that can reconstruct the activity patterns contained in the given data. Ideally, such inference would be: made using model-free techniques; capture non-linear, multivariate, directional relationships; handle small amounts of data, and be statistically robust. The information-theoretic measure transfer entropy (TE) [1] (a non-linear Granger causality) is becoming

Highlights

  • Effective connectivity analysis is a popular approach in computational neuroscience, whereby one seeks to infer a network of directed edges between neural variables which can explain their observed time-series dynamics

  • * Correspondence: joseph.lizier@csiro.au 1CSIRO Information and Communications Technology Centre, Marsfield, NSW 2122, Australia Full list of author information is available at the end of the article widely used for this purpose [2]

  • We aim to extend transfer entropy (TE)-based effective network inference to multivariate techniques, : capturing collective interactions where target outcomes are due to multiple source variables; eliminating spurious connections for correlated sources; and avoiding combinatorial explosions in source groups evaluated

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Summary

Introduction

Effective connectivity analysis is a popular approach in computational neuroscience, whereby one seeks to infer a network of directed edges between neural variables (e.g. voxels or regions in fMRI, or reconstructed source time series in MEG data) which can explain their observed time-series dynamics. The information-theoretic measure transfer entropy (TE) [1] (a non-linear Granger causality) is becoming * Correspondence: joseph.lizier@csiro.au 1CSIRO Information and Communications Technology Centre, Marsfield, NSW 2122, Australia Full list of author information is available at the end of the article widely used for this purpose [2].

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