Abstract

The soil-borne gram-positive bacteria Aneurinibacillus migulanus strain Nagano shows considerable potential as a biocontrol agent against plant diseases. In contrast, A. migulanus NCTC 7096 proved less effective for inhibition of plant pathogens. Nagano strain exerts biocontrol activity against some gram-positive and gram-negative bacteria, fungi and oomycetes through the production of gramicidin S (GS). Apart from the antibiotic effects, GS increases the rate of evaporation from the plant surface, reducing periods of surface wetness and thereby indirectly inhibiting spore germination. To elucidate the molecular basis of differential biocontrol abilities of Nagano and NCTC 7096, we compared GS production and biosurfactant secretion in addition to genome mining of the genomes. Our results proved that: (i) Using oil spreading, blood agar lysis, surface tension and tomato leaves wetness assays, Nagano showed increased biosurfactant secretion in comparison with NCTC 7096, (ii) Genome mining indicated the presence of GS genes in both Nagano and NCTC 7096 with two amino acid units difference between the strains: T342I and P419S. Using 3D models and the DUET server, T342I and P419S were predicted to decrease the stability of the NCTC 7096 GS synthase, (iii) Nagano produced two additional GS-like molecules GS-1155 (molecular weight 1155) and GS-1169 (molecular weight 1169), where one or two ornithine residues replace lysine in the peptide. There was also a negative correlation between surface tension and the quantity of GS-1169 present in Nagano, and (iv) the Nagano genome had a full protein network of exopolysaccharide biosynthesis in contrast to NCTC 7096 which lacked the first enzyme of the network. NCTC 7096 is unable to form biofilms as observed for Nagano. Different molecular layers, mainly gramicidin secondary metabolite production, account for differential biocontrol abilities of Nagano and NCTC 7096. This work highlighted the basis of differential biological control abilities between strains belonging to the same species and demonstrates techniques useful to the screening of effective biocontrol strains for environmentally friendly secondary metabolites that can be used to manage plant pathogens in the field.

Highlights

  • Plant diseases are responsible for many economic losses in landscape, agriculture and forest settings through negative impacts on yields, quality of crops and visual amenity

  • Our results confirmed previous findings suggesting that A. migulanus Nagano has potential as a biological control agents (BCAs) against plant diseases (Edwards and Seddon, 2001; Schmitt and Seddon, 2005; Chandel et al, 2010; Alenezi et al, 2016a)

  • These results indicated clearly that selection of an appropriate strain of A. migulanus for use as a BCA is crucial in obtaining successful disease management

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Summary

Introduction

Plant diseases are responsible for many economic losses in landscape, agriculture and forest settings through negative impacts on yields, quality of crops and visual amenity. Affected food may contain pathogen-produced toxins that can cause poisoning or death in humans and other animals. The application of widely used xenobiotic chemicals (pesticides) to crops is expensive, potentially resulting in toxicity to other biota; chemical residues may present a hazard to animals and humans consuming the food (Yánez-Mendizábal et al, 2011). Producing pesticidefree food and maintaining a healthy environment are the main reasons to promote the development of environmentally sound approaches of disease control. Biological control agents (BCAs) that can suppress pathogen activities with less damage to the wider environment are increasingly used in agriculture (Roberts and Lohrke, 2003; Mefteh et al, 2017)

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