Identifying Early Indicators of Tail Biting in Pigs by Variable Selection Using Partial Least Squares Regression.

Abstract

This study examined relevant variables for predicting the prevalence of pigs with a tail lesion in rearing (REA) and fattening (FAT). Tail lesions were recorded at two scoring days a week in six pens in both REA (10 batches, 840 scoring days) and FAT (5 batches, 624 scoring days). To select the variables that best explain the variation within the prevalence of pigs with a tail lesion, partial least squares regression models were used with the variable importance in projection (VIP) and regression coefficients (β) as selection criteria. In REA, five factors were extracted explaining 60.6% of the dependent variable's variance, whereas in FAT five extracted factors explained 62.4% of the dependent variable's variance. According to VIP and β, seven variables were selected in REA and six in FAT with the tail posture being the most important variable. In addition, skin lesions, treatment index in the suckling phase, water consumption (mean), activity time (mean; CV) and exhaust air rate (CV) were selected in REA. In FAT, additional musculoskeletal system issues, activity time (mean; CV) and exhaust air rate (mean; CV) were selected according to VIP and β. The selected variables indicate which variables should be collected in the stable to e.g., predict tail biting.