Abstract

BackgroundProximal symphalangism (SYM1) is a rare genetic bone disorder characterized by the fusion of proximal interphalangeal joints in the hands and feet. Genetic studies have identified two genes underlying SYM1 as the noggin (NOG) and the growth differentiation factor 5 (GDF5).Case ReportIn the present report, a 43-year-old gravida at 11 weeks of gestation was referred for evaluation of abnormal fusions of the joints. In the initial diagnosis, physical examination was undertaken. However, traditional radiological examination was not applied due to the need to protect the fetus, making diagnosis results inefficient to determine the exact disease affecting the proband. To acquire alternative clinical evidences, we conducted radiological examinations on two other affected family members. The radiological examination revealed that they carried the symphalangism accompanied with tarsal coalition, a very rare manifestation of SYM1. A combination of whole exome sequencing (WES) and Sanger sequencing revealed a novel heterozygous missense mutation (c.163G > T; p.Asp55Tyr) in the NOG gene, which could be associated with the observed pathogenic SYM1 in the studied family. The p.Asp55Tyr mutation co-segregated with SYM1 through the affected and unaffected family members. In silico structural modeling of the p.Asp55Tyr mutation showed that it abolishes the interaction with the Arg167 residue and causes a change in the electrostatic potential profile of the type II binding site of the noggin protein.ConclusionOur findings indicate that the genetic test based on WES can be useful in diagnosing SYM1 patients, with particular advantages in preventing the fetus from contacting harmful X-ray through the traditional radiography. The novel pathogenic mutation identified would further expand our understanding of the mutation spectrum of NOG in association with SYM1 disease and provide a guidance on how to determine whether the fetus is affected by SYM1 through the prenatal diagnosis.

Highlights

  • Proximal symphalangism (MIM#185800, SYM1) is a rare autosomal dominant bone disorder with principal features of variable fusions of the proximal interphalangeal joints of fingers, toes, carpus, and tarsus, as well as conductive hearing loss in some cases (Strasburger et al, 1965)

  • According to the latest statistics from the Human Gene Mutation Database1, 62 NOG functional mutations are considered to be responsible for SYM1; in addition, such mutations are responsible for some other similar syndromes including brachydactyly type B2 (MIM#611377, BDB2), multiple synostoses syndrome 1 (MIM#186500, SYNS1), stapes ankylosis with broad thumb and toes (MIM#184460, SABTT) and tarsal-carpal coalition syndrome (MIM#186570, TCC)

  • Upon carefully analysis of the clinical impacts of all the mutations identified, we confirmed that novel missense mutation c.163G > T (p.Asp55Tyr) in NOG gene was the pathogenic mutation in this family

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Summary

Introduction

Proximal symphalangism (MIM#185800, SYM1) is a rare autosomal dominant bone disorder with principal features of variable fusions of the proximal interphalangeal joints of fingers, toes, carpus, and tarsus, as well as conductive hearing loss in some cases (Strasburger et al, 1965). Upon carefully analysis of the clinical impacts of all the mutations identified, we confirmed that novel missense mutation c.163G > T (p.Asp55Tyr) in NOG gene (reference NM_005450) was the pathogenic mutation in this family. Proximal symphalangism (SYM1) is a rare genetic bone disorder characterized by the fusion of proximal interphalangeal joints in the hands and feet. Genetic studies have identified two genes underlying SYM1 as the noggin (NOG) and the growth differentiation factor 5 (GDF5). A combination of whole exome sequencing (WES) and Sanger sequencing revealed a novel heterozygous missense mutation (c.163G > T; p.Asp55Tyr) in the NOG gene, which could be associated with the observed pathogenic SYM1 in the studied family. In silico structural modeling of the p.Asp55Tyr mutation showed that it abolishes the interaction with the Arg167 residue and causes a change in the electrostatic potential profile of the type II binding site of the noggin protein

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