Abstract

The identities of signal transducer proteins that integrate histone hypoacetylation and transcriptional repression are largely unknown. Here we demonstrate that THAP7, an uncharacterized member of the recently identified THAP (Thanatos-associated protein) family of proteins, is ubiquitously expressed, associates with chromatin, and represses transcription. THAP7 binds preferentially to hypoacetylated (un-, mono-, and diacetylated) histone H4 tails in vitro via its C-terminal 77 amino acids. Deletion of this domain, or treatment of cells with the histone deacetylase inhibitor TSA, which leads to histone hyperacetylation, partially disrupts THAP7/chromatin association in living cells. THAP7 coimmunoprecipitates with histone deacetylase 3 (HDAC3) and the nuclear hormone receptor corepressor (NCoR) and represses transcription as a Gal4 fusion protein. Chromatin immunoprecipitation assays demonstrate that these corepressors are recruited to promoters in a THAP7 dependent manner and promote histone H3 hypoacetylation. The conserved THAP domain is a key determinant for full HDAC3 association in vitro, and both the THAP domain and the histone interaction domain are important for the repressive properties of THAP7. Full repression mediated by THAP7 is also dependent on NCoR expression. We hypothesize that THAP7 is a dual function repressor protein that actively targets deacetylation of histone H3 necessary to establish transcriptional repression and functions as a signal transducer of the repressive mark of hypoacetylated histone H4. This is the first demonstration of the transcriptional regulatory properties of a human THAP domain protein, and a critical identification of a potential transducer of the repressive signal of hypoacetylated histone H4 in higher eukaryotes.

Highlights

  • The dynamic nature of chromatin modification clearly remains at the core of the process of transcription

  • Deletion of the histone interaction domain (HID) from amino acids 232–309 relieved repression by ϳ50%. Deletion of both the THAP domains and HID completely relieved repression mediated by THAP7-(101–231). These domains are designated as repressor domains 1 and 2 (RD1 and RD2). (It is important to note that there were subtle differences in the expression of the THAP7 mutants, expression of transcriptional repression defective mutant THAP7(101–231) is at comparable levels to mutants that still repress transcription.) This repressor domain mapping is consistent with our results of Figs. 3 and 6C in which we show that HID-(232– 309) is the major histone interacting domain, whereas the THAP domain [1–100] is the major histone deacetylase 3 (HDAC3) association site

  • When we examined the presence of HDACs and nuclear hormone receptor corepressor (NCoR) at the promoter we found a significant increase in HDAC3 and NCoR recruitment to the promoter in Gal4 DNA-binding protein (DBD)-THAP7-transfected cells compared with Gal4 DBDtransfected cells, but there was no significant change in HDAC4 recruitment

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Summary

Introduction

The dynamic nature of chromatin modification clearly remains at the core of the process of transcription. THAP7 coimmunoprecipitates with histone deacetylase 3 (HDAC3) and the nuclear hormone receptor corepressor (NCoR) and represses transcription as a Gal4 fusion protein. This is the first demonstration of the transcriptional regulatory properties of a human THAP domain protein, and a critical identification of a potential transducer of the repressive signal of hypoacetylated histone H4 in higher eukaryotes.

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