Abstract

Deep learning has achieved a great success in natural image classification. To overcome data-scarcity in computational pathology, recent studies exploit transfer learning to reuse knowledge gained from natural images in pathology image analysis, aiming to build effective pathology image diagnosis models. Since transferability of knowledge heavily depends on the similarity of the original and target tasks, significant differences in image content and statistics between pathology images and natural images raise the questions: how much knowledge is transferable? Is the transferred information equally contributed by pre-trained layers? If not, is there a sweet spot in transfer learning that balances transferred model's complexity and performance? To answer these questions, this paper proposes a framework to quantify knowledge gain by a particular layer, conducts an empirical investigation in pathology image centered transfer learning, and reports some interesting observations. Particularly, compared to the performance baseline obtained by a random-weight model, though transferability of off-the-shelf representations from deep layers heavily depend on specific pathology image sets, the general representation generated by early layers does convey transferred knowledge in various image classification applications. The trade-off between transferable performance and transferred model's complexity observed in this study encourages further investigation of specific metric and tools to quantify effectiveness of transfer learning in future.

Highlights

  • Pathology is a medical sub-specialty that studies and practices the diagnosis of disease through examining biopsy samples under microscopes by pathologists

  • The experimental results for the pathology image datasets are shown in Fig 5, where ach marker is the figure represents the average accuracy over the validation set for 50 times

  • Since no hand-crafted method designed for the breast cancer histology images (BATCH) set, gray dash line is not shown in the right figure

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Summary

Introduction

Pathology is a medical sub-specialty that studies and practices the diagnosis of disease through examining biopsy samples under microscopes by pathologists. It serves as the golden truth of cancer diagnosis. To address subjectivity in pathology examination [1, 2], computational pathology exploits image analysis and machine learning for histological information understanding in tissue images. Owing to its time-efficiency, consistency, and objectivity, computational pathology merges as a promising approach to cancer diagnosis and prognosis. Inspired by domain knowledge of cancer diagnosis, many algorithms based on hand-crafted feature.

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