Abstract

BackgroundDifferent classes of latency reversing agents (LRAs) are being evaluated to measure their effects in reactivating HIV replication from latently infected cells. A limited number of studies have demonstrated additive effects of LRAs with the viral protein Tat in initiating transcription, but less is known about how LRAs interact with Tat, particularly through basic residues that may be post-translationally modified to alter the behaviour of Tat for processive transcription and co-transcriptional RNA processing.ResultsHere we show that various lysine and arginine mutations reduce the capacity of Tat to induce both transcription and mRNA splicing. The lysine 28 and lysine 50 residues of Tat, or the acetylation and methylation modifications of these basic amino acids, were essential for Tat transcriptional control, and also for the proviral expression effects elicited by histone deacetylase inhibitors (HDACi) or the bromodomain inhibitor JQ1. We also found that JQ1 was the only LRA tested that could induce HIV mRNA splicing in the absence of Tat, or rescue splicing for Tat lysine mutants in a BRD4-dependent manner.ConclusionsOur data provide evidence that Tat activities in both co-transcriptional RNA processing together with transcriptional initiation and processivity are crucial during reactivation of latent HIV infection. The HDACi and JQ1 LRAs act with Tat to increase transcription, but JQ1 also enables post-transcriptional mRNA splicing. Tat residues K28 and K50, or their modifications through acetylation or methylation, are critical for LRAs that function in conjunction with Tat.

Highlights

  • Different classes of latency reversing agents (LRAs) are being evaluated to measure their effects in reactivating HIV replication from latently infected cells

  • We investigated the effects of Tat mutants on the activity of a panel of LRAs and found that post translational modifications of different lysine residues of Tat are important for its activity with different LRAs, with differing abilities to actively initiate transcription and/or splicing

  • A novel in vitro model using fluorescent reporter proteins to test the impact of interventions on HIV transcription and splicing A potent LRA is required for efficient reactivation and clearance of latent proviruses

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Summary

Introduction

Different classes of latency reversing agents (LRAs) are being evaluated to measure their effects in reactivating HIV replication from latently infected cells. A limited number of studies have demonstrated additive effects of LRAs with the viral protein Tat in initiating transcription, but less is known about how LRAs interact with Tat, through basic residues that may be post-translationally modified to alter the behaviour of Tat for processive transcription and co-transcriptional RNA processing. Clinical trials of these agents in HIV-infected individuals on ART demonstrated modest increases in cell-associated unspliced HIV mRNA (US RNA), indicative of the initiation of viral transcription, when used alone, these studies failed to show a reduction in the frequency of latently infected cells as measured by HIV DNA [2,3,4,5,6,7]. Depending on which residue is modified and the type of modification it carries, the behaviour of Khoury et al Retrovirology (2018) 15:36

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