Abstract
Maize (Zea mays L.) production is constrained by drought and heat stresses. The combination of these two stresses is likely to be more detrimental. To breed for maize cultivars tolerant of these stresses, 162 tropical maize inbred lines were evaluated under combined heat and drought (CHD) and terminal drought (TD) conditions. The mixed linear model was employed for the genome-wide association study using 7834 SNP markers and several phenotypic data including, days to 50% anthesis (AD) and silking (SD), husk cover (HUSKC), and grain yield (GY). In total, 66, 27, and 24 SNPs were associated with the traits evaluated under CHD, TD, and their combined effects, respectively. Of these, four single nucleotide polymorphism (SNP) markers (SNP_161703060 on Chr01, SNP_196800695 on Chr02, SNP_195454836 on Chr05, and SNP_51772182 on Chr07) had pleiotropic effects on both AD and SD under CHD conditions. Four SNPs (SNP_138825271 (Chr03), SNP_244895453 (Chr04), SNP_168561609 (Chr05), and SNP_62970998 (Chr06)) were associated with AD, SD, and HUSKC under TD. Twelve candidate genes containing phytohormone cis-acting regulating elements were implicated in the regulation of plant responses to multiple stress conditions including heat and drought. The SNPs and candidate genes identified in the study will provide invaluable information for breeding climate smart maize varieties under tropical conditions following validation of the SNP markers.
Highlights
The world’s population is estimated to reach 10 billion by 2050 [1]
The objectives of the study were to (i) map the genomic regions associated with grain yield (GY) and its related traits under combined heat and drought (CHD) conditions, (ii) identify markers linked to the various traits under terminal drought (TD) conditions, and (iii) predict the putative candidate genes underlying the genomic regions of the studied traits under stress conditions
Under terminal drought condition on the other hand, mean ± standard error values for AD, SD, and GY of 48.09 ± 0.35 days (23.13–53.22 days), 52.97 ± 0.40 days (25.09–59.91 days), and 1406.00 ± 41.70 kg/ha (310.40–6464 kg/ha), respectively (Supplementary Table S2a,b) were recorded. These results suggest that CHD and TD stresses alter the phenological, growth, and yield related traits in maize
Summary
The world’s population is estimated to reach 10 billion by 2050 [1]. This, together with reduction in arable land and climate change will lead to a rise in abiotic and biotic stresses which are the major threats to food and nutritional security. With the fast increasing world population, maize production and productivity are expected to be significantly reduced by the adverse impacts of climate change and lead to a global food crisis which is expected to have major impacts in SSA in particular [6]. The effects of adverse climatic conditions such as high temperatures, erratic rainfall patterns, and drought could have serious impacts on maize production and productivity and significantly reduce global food production [7,8]. Maize is well adapted and substantially produced and utilized in the savannas of SSA, the simultaneous incidence of abiotic stresses such as drought and high temperature during the maize flowering period could reduce the photosynthetic rate, accelerate leaf senescence, induce kernel abortion, and result in drastic yield losses [9,10]. Yield reduction averaged 46% under managed drought stress, 55% under heat stress, and 66% under combined drought and heat stress, which reflected the hypo-additive effect of drought and heat stress on grain yield of the maize accessions
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