Abstract
We had participated in the CASP4 (Fourth Community Wide Experiment on the Critical Assessment of Techniques for Protein Structure Prediction) that is the competition of the protein structure prediction in 2000 [3]. Our server were estimated almost the best in the CAFASP2 (Critical Assessment of Fully Automated Structure Prediction) that is the full automatic homology modeling section of CASP4 [1, 2]. In this competition we used homology modeling software FAMS (Full automatic protein modeling system) that we had been developed for several years [4]. Therefore usefulness of the software FAMS was clearly shown in these competitions. We also have developed software FAMSBASE that is web browser interface of FAMS model structure database. In this article we describe that proteins coded in the all the genomes were modeled. The FAMS modeling web service is available in http://physchem.pharm.kitasato-u.ac.jp/. FAMSBASE is available in http://prtds.pharm.kitasato-u.ac.jp/ or http://famsbase.bio. nagoya-u.ac.jp/.
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