Abstract

Genetic variation in the FAM13A (Family with Sequence Similarity 13 Member A) locus has been associated with several glycemic and metabolic traits in genome-wide association studies (GWAS). Here, we demonstrate that in humans, FAM13A alleles are associated with increased FAM13A expression in subcutaneous adipose tissue (SAT) and an insulin resistance-related phenotype (e.g. higher waist-to-hip ratio and fasting insulin levels, but lower body fat). In human adipocyte models, knockdown of FAM13A in preadipocytes accelerates adipocyte differentiation. In mice, Fam13a knockout (KO) have a lower visceral to subcutaneous fat (VAT/SAT) ratio after high-fat diet challenge, in comparison to their wild-type counterparts. Subcutaneous adipocytes in KO mice show a size distribution shift toward an increased number of smaller adipocytes, along with an improved adipogenic potential. Our results indicate that GWAS-associated variants within the FAM13A locus alter adipose FAM13A expression, which in turn, regulates adipocyte differentiation and contribute to changes in body fat distribution.

Highlights

  • Genetic variation in the FAM13A (Family with Sequence Similarity 13 Member A) locus has been associated with several glycemic and metabolic traits in genome-wide association studies (GWAS)

  • By using refined measures of body composition and fat distribution, follow-up analysis shows that the lower Body mass index (BMI)-associated variants are associated with a higher waist-to-hip ratio (WHR) and visceral-to-subcutaneous adipose tissue ratio (VAT/SAT), which is driven by a fat deposition shift from subcutaneous depots around the hip to visceral depots around the waist[5]

  • Variants in the FAM13A locus, including rs3822072, rs1377290, and rs9991328, have been reported as lead variants within the locus across GWAS studies of insulin resistance (IR)-related traits such as body fat percentage, WHRadjBMI, fasting insulin levels. These variants were associated with FAM13A expression in subcutaneous adipose tissue (SAT), but not in visceral adipose tissue (VAT; Fig. 1) in data from the Genotype-Tissue Expression project (GTEx v7)

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Summary

Introduction

Genetic variation in the FAM13A (Family with Sequence Similarity 13 Member A) locus has been associated with several glycemic and metabolic traits in genome-wide association studies (GWAS). By using refined measures of body composition and fat distribution, follow-up analysis shows that the lower BMI-associated variants are associated with a higher waist-to-hip ratio (WHR) and visceral-to-subcutaneous adipose tissue ratio (VAT/SAT), which is driven by a fat deposition shift from subcutaneous depots around the hip to visceral depots around the waist[5]. Among these unfavorable fat distribution risk loci are variants located in or near FAM13A (Family With Sequence Similarity 13 Member A)[4,5]. Our in vitro and in vivo experimental studies show that FAM13A plays a role in adipocyte differentiation and function

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