Abstract

The packaging of the eukaryotic genome into chromatin represses gene expression by blocking access of the general transcription machinery to the underlying DNA sequences. Accordingly, eukaryotes have developed a variety of mechanisms to disrupt, alter, or disassemble nucleosomes from promoter regions and open reading frames to allow transcription to occur. Although we know that chromatin disassembly from the yeast PHO5 promoter is triggered by the Pho4 activator, the mechanism is far from clear. Here we show that the Pho4 activator can occupy its nucleosome-bound DNA binding site within the PHO5 promoter. In contrast to the role of Saccharomyces cerevisiae FACT (facilitates chromatin transcription) complex in assembling chromatin within open reading frames, we find that FACT is involved in the disassembly of histones H2A/H2B from the PHO5 promoter during transcriptional induction. We have also discovered that the proteasome is required for efficient chromatin disassembly and transcriptional induction from the PHO5 promoter. Mutants of the degradation function of the proteasome have a defect in recruitment of the Pho4 activator, whereas mutants of the ATPase cap of the proteasome do recruit Pho4 but are still delayed for chromatin assembly. Finally, we rule out the possibility that the proteasome or ATPase cap is driving chromatin disassembly via a potential ATP-dependent chromatin remodeling activity.

Highlights

  • We have previously shown that the histone chaperone Asf1 promotes the disassembly of histones H3/H4 from multiple yeast promoter regions during transcriptional induction [4, 5], whereas the histone chaperone Spt6 promotes the deposition of H3/H4 onto promoters during transcriptional repression [6]

  • The delay in transcriptional induction in the absence of Nhp6 was most likely due to the delay in chromatin disassembly that is apparent in the absence of Nhp6 (Fig. 2G). These results demonstrate that FACT has a novel function in promoting histone H2A/H2B removal from promoter regions during transcriptional induction

  • Activator Binding to the Nucleosome Triggers Subsequent Chromatin Disassembly— it is clear that activator binding is the trigger for the removal of histones from the underlying DNA sequence, the mechanism whereby the activators start this process was far from clear

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Summary

Introduction

Dynamic chromatin assembly and disassembly processes occur within the open reading frame during transcription. The histone chaperone Spt is required for the deposition of H3/H4 onto chromatin behind the RNA polymerase [7], whereas the histone chaperone FACT (facilitates chromatin transcription) assembles H2A/H2B onto the DNA behind the elongating RNA polymerase [7, 8]. Spt was originally identified to be a suppressor of Ty insertions into HIS4 and LYS2 [10] This implies that FACT has a role in the initiation of transcription, the molecular role of FACT at promoters has not yet been defined. BY4741 BY4741asf1⌬ BY4741bre1⌬ BY4741rad6⌬ FY56 L577 JLY096 JLY097 Y865 Y869 JR5-2A HTB1 JR5-2A htb1-KR MSY535 MYS536 MSY559 SKW200 SC733 SC727 JKT0018 SC782 SC779

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