Empirically exploring the space of monostationarity in dual phosphorylation

Abstract

AbstractThe dual phosphorylation network provides an essential component of intracellular signaling, affecting the expression of phenotypes and cell metabolism. For particular choices of kinetic parameters, this system exhibits multistationarity, a property that is relevant in the decision-making of cells. Determining which reaction rate constants correspond to monostationarity and which produce multistationarity is an open problem. The system’s monostationarity is linked to the nonnegativity of a specific polynomial. A previous study by Feliu et al. provides a sufficient condition for monostationarity via a decomposition of this polynomial into nonnegative circuit polynomials. However, this decomposition is not unique. We extend their work by a systematic approach to classifying such decompositions in the dual phosphorylation network. Using this classification, we provide a qualitative comparison of the decompositions into nonnegative circuit polynomials via empirical experiments and improve on previous conditions for the region of monostationarity.