Efficient detection of data entry errors in large-scale public health surveys: an unsupervised machine learning approach

Abstract

Data entry errors in large-scale public health surveys can undermine the effectiveness of data-driven interventions. Therefore, identifying these data entry errors is crucial for public health experts. In large-scale public health surveys, manually verifying the accuracy of every data point by domain experts is nearly impossible. This study evaluates unsupervised machine learning algorithms for detecting these errors, focusing on the 'weight' parameter in the Annual Health Survey (AHS) dataset. The AHS, conducted by the Ministry of Health and Family Welfare, Government of India, in collaboration with the Registrar General of India, is a large-scale, stratified, household-level survey targeting maternal and child health across nine states in India. The dataset is freely available on the Open Government Data (OGD) Platform of India for public health research. In this study, five algorithms—DBSCAN, K-Means, Gaussian Mixture Model (GMM), Isolation Forest (IF), and One-Class SVM (1C-SVM) were applied to detect erroneous data entries. The evaluation process involved comprehensive preprocessing and feature engineering to optimize detection capabilities. Performance metrics such as precision, recall, accuracy, false anomaly, and missed anomaly rates were used to assess each algorithm. Among these, DBSCAN demonstrated superior performance, achieving a recall of 94.7% and a precision of 81.9%, making it highly effective for this task. The findings underscore the potential of unsupervised machine learning in automating the detection of data entry errors, thereby improving the integrity of public health data. This research contributes to the advancement of precision public health, supporting more accurate and reliable evidence-based decision-making and policy formulation.