Abstract
Through the advancements in recent decades, childhood acute lymphoblastic leukemia (ALL) is gradually becoming a highly curable disease. However, the truth is there remaining relapse in ∼15% of ALL cases with dismal outcomes. RAS mutations, in particular NRAS mutations, were predominant mutations affecting relapse susceptibility. KRAS mutations targeting has been successfully exploited, while NRAS mutation targeting remains to be explored due to its complicated and compensatory mechanisms. Using targeted sequencing, we profiled RAS mutations in 333 primary and 18 relapsed ALL patients and examined their impact on ALL leukemogenesis, therapeutic potential, and treatment outcome. Cumulative analysis showed that RAS mutations were associated with a higher relapse incidence in children with ALL. In vitro cellular assays revealed that about one-third of the NRAS mutations significantly transformed Ba/F3 cells as measured by IL3-independent growth. Meanwhile, we applied a high-throughput drug screening method to characterize variable mutation-related candidate targeted agents and uncovered that leukemogenic-NRAS mutations might respond to MEK, autophagy, Akt, EGFR signaling, Polo−like Kinase, Src signaling, and TGF−β receptor inhibition depending on the mutation profile.
Highlights
Translational genomic research and risk stratification-directed therapy have gradually made childhood acute lymphoblastic leukemia (ALL) a highly curable cancers (Vora et al, 2013; Pui et al, 2018), with over 90% leukemia-free survival in developed countries
We retrospectively evaluated the impact of RAS mutations on children with ALL enrolled onto CCCG-ALL-2015 clinical trial and tested the contributions of NRAS mutations on ALL leukemogenesis and drug response
To demonstrate the difference between B cell ALL (B-ALL) and T-cell ALL (T-ALL) as confirmed by flow cytometric immunophenotyping assay, we identified a higher RAS mutation frequency in newly diagnostic B-ALL patients than that in T-ALL patients (14.7 vs 0% in KRAS; 9.3 vs 6.7% in NRAS; 0.6 vs 0% in HRAS, Figure 1C)
Summary
Translational genomic research and risk stratification-directed therapy have gradually made childhood acute lymphoblastic leukemia (ALL) a highly curable cancers (Vora et al, 2013; Pui et al, 2018), with over 90% leukemia-free survival in developed countries. Studies have shown that the prevalence of NRAS mutations varies from 15 to 34% in children with ALL (Case et al, 2008; Irving et al, 2014; Ma et al, 2015). Ma et al has reported that NRAS mutations conferred susceptibilities on B cell ALL (B-ALL) relapse (Ma et al, 2015). It’s highly needed to explore the translational potential of NRAS mutations in pediatric ALL
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