Effect of additives on the crystallization of glutamate dehydrogenase from Clostridium symbiosum: Evidence for a ligand-induced conformational change

Abstract

A new crystal form of the hexameric NAD +-linked glutamate dehydrogenase (GDH) from Clostridium symbiosum has been grown using the hanging drop method of vapour diffusion. The crystals are obtained either by using high concentrations of the amino acid substrate of the enzyme, glutamate, as the precipitant or by co-crystallization from ammonium sulphate in the presence of either p-chloromercuribenzene sulphonate or potassium tetracyano-platinate. The crystals diffract well and X-ray photographs have established that they are in the space group R32. Considerations of the values of V m indicate that the asymmetric unit of the R32 crystals contains a single subunit. Packing considerations based on the structure of the native enzyme determined from a different crystal form suggest that the molecule must undergo a significant conformational change in order to be accommodated in the new cell. Such a conformational rearrangement may represent an important step in the catalytic cycle.